| Sequence 1: | NP_001262897.1 | Gene: | Rox8 / 42848 | FlyBaseID: | FBgn0005649 | Length: | 470 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_112539.2 | Gene: | Cstf2t / 83410 | MGIID: | 1932622 | Length: | 632 | Species: | Mus musculus |
| Alignment Length: | 235 | Identity: | 61/235 - (25%) |
|---|---|---|---|
| Similarity: | 103/235 - (43%) | Gaps: | 47/235 - (20%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKII--REPGNDP-YAFIEYSNYQAATTAL 62
Fly 63 TAMNKRLFLEKEIKVNWATSPGNQ-------PKTDISSHHHIFVGD-LSPEIETETLREAFAP-- 117
Fly 118 ----FGEISNCRI-VRDPHTMKSK--------GYAFVS---FVKKAEAENAIQAMNGQWIGSRSI 166
Fly 167 RTNWSTRKLPPPREPSKGGGQGG----GMGG-GPGNGSGV 201 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rox8 | NP_001262897.1 | ELAV_HUD_SF | 5..274 | CDD:273741 | 58/231 (25%) |
| RRM1_TIA1_like | 9..80 | CDD:240798 | 23/73 (32%) | ||
| RRM2_TIA1_like | 96..170 | CDD:240799 | 16/92 (17%) | ||
| RRM3_TIA1_like | 221..294 | CDD:240800 | |||
| Cstf2t | NP_112539.2 | RRM | <16..>109 | CDD:223796 | 27/92 (29%) |
| RRM_CSTF2_CSTF2T | 18..92 | CDD:241115 | 23/73 (32%) | ||
| CSTF2_hinge | 113..191 | CDD:291025 | 14/80 (18%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 201..296 | 13/32 (41%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 365..433 | ||||
| 8 X 5 AA tandem repeats of M-E-T-R-[AG] | 428..466 | ||||
| 12 X 5 AA tandem repeats of G-[AT]-G-[MI]-Q | 508..565 | ||||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 519..590 | ||||
| CSTF_C | 588..628 | CDD:291002 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||