Protein Alignment Rox8 and RS40

DIOPT Version :10

• Sequence 1: NP_732944.2
• Gene: Rox8 / 42848
• FlyBaseID: FBgn0005649
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_194280.1
• Gene: RS40 / 828654
• AraportID: AT4G25500
• Length: 350
• Species: Arabidopsis thaliana
• Alignment Length: 209
• Identity: 48/209 - (22%)
• Similarity: 93/209 - (44%)
• Gaps: 39/209 - (18%)

  Fly    97 IFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWI 161
            :|.|:...:.....|...|..:|::...       .||: |:|||....:.:||:||:|::....
plant     4 VFCGNFEYDAREGDLERLFRKYGKVERV-------DMKA-GFAFVYMEDERDAEDAIRALDRFEF 60

  Fly   162 G--SRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVY 224
            |  .|.:|..|:        :..:||.:..| ||...:.|.::               |:.|...
plant    61 GRKGRRLRVEWT--------KSERGGDKRSG-GGSRRSSSSMR---------------PSKTLFV 101

  Fly   225 CGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKC 289
            ......|..:.|| .|||..:|.|.:||:  .:.|:||::..:|.|..|::.::||::...::..
plant   102 INFDADNTRTRDL-EKHFEPYGKIVNVRI--RRNFAFIQYEAQEDATRALDASNNSKLMDKVISV 163

  Fly   290 FWGKENGGDNSANN 303
            .:..::  |::..|
plant   164 EYAVKD--DDARGN 175

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_732944.2	RRM1_TIA1_like	9..80	CDD:409788
		RRM2_TIA1_like	96..170	CDD:409789	19/74 (26%)
		RRM_SF	221..292	CDD:473069	19/70 (27%)
RS40	NP_194280.1	RRM1_AtRSp31_like	2..73	CDD:409680	20/84 (24%)
		RRM_SF	98..167	CDD:473069	19/71 (27%)