DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rox8 and UBA2A

DIOPT Version :9

Sequence 1:	NP_001262897.1	Gene:	Rox8 / 42848	FlyBaseID:	FBgn0005649	Length:	470	Species:	Drosophila melanogaster
Sequence 2:	NP_001190109.1	Gene:	UBA2A / 824853	AraportID:	AT3G56860	Length:	478	Species:	Arabidopsis thaliana

Alignment Length:	368	Identity:	92/368 - (25%)
Similarity:	132/368 - (35%)	Gaps:	92/368 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly    94 HHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNG 158
            |..|||..|..:.:||||.|||..:|||.:|:.|.|..:.|||||.|:.:..::.|.||::....
plant   139 HRKIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQK 203

  Fly   159 QWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTV 223
            : ||||......:::              |...||.|...:.|....:|      :.|..|...:
plant   204 K-IGSRMTACQLASK--------------GPVFGGAPIAAAAVSAPAQH------SNSEHTQKKI 247

  Fly   224 YCGGFPPNVISDDLMHKHFVQFGPIQ------DVRVFKDKGFSFIKFVTKEAAAHAIE------- 275
            |.......:....|: ..|.:||.|:      |....:.|||....:.:.|:|..|:|
plant   248 YVSNVGAELDPQKLL-MFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFE 311

  Fly   276 --------------------HTHNSEV-------------------HGNLVKCFWGKENG-GDNS 300
                                |.||...                   ||:|:.   |...| |..:
plant   312 GHILHCQKAIDGPKPGKQQQHHHNPHAYNNPRYQRNDNNGYGPPGGHGHLMA---GNPAGMGGPT 373

  Fly   301 ANNLNAA--AAAAAASANVAAVAAANAAVAAGAGMPGQMMTQQQIAAATGAAIP----GQMMTPQ 359
            |..:|.|  .|..|..|:..|..|.|.|:  |..:.|.:.|...:....|..:|    .|.|.|.
plant   374 AQVINPAIGQALTALLASQGAGLAFNPAI--GQALLGSLGTAAGVNPGNGVGMPTGYGTQAMAPG 436

  Fly   360 QIAAQYPYAYQQMGYWYP-PATYPTTQMQTQYMQQGYYPYAYP 401
            .:.........|.||..| |.     |..|...|.|..||..|
plant   437 TMPGYGTQPGLQGGYQTPQPG-----QGGTSRGQHGVGPYGTP 474

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_001262897.1	ELAV_HUD_SF	5..274	CDD:273741	51/185 (28%)
		RRM1_TIA1_like	9..80	CDD:240798
		RRM2_TIA1_like	96..170	CDD:240799	30/73 (41%)
		RRM3_TIA1_like	221..294	CDD:240800	21/124 (17%)
UBA2A	NP_001190109.1	PABP-1234	136..>347	CDD:130689	56/229 (24%)
		RRM_SF	140..215	CDD:418427	30/75 (40%)
		Med15	361..>465	CDD:312941	29/113 (26%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000