DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rox8 and GRP4

DIOPT Version :10

Sequence 1:NP_732944.2 Gene:Rox8 / 42848 FlyBaseID:FBgn0005649 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_189025.1 Gene:GRP4 / 821966 AraportID:AT3G23830 Length:136 Species:Arabidopsis thaliana


Alignment Length:102 Identity:43/102 - (42%)
Similarity:62/102 - (60%) Gaps:3/102 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 IFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWI 161
            :|||.||...:..:|::||..|||::...::.|..|.:|:|:.||||..:..|.|||:.|:|:.:
plant    37 LFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKEL 101

  Fly   162 GSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNG 198
            ..|.||.|.:|.:...||  |..|| |||.|||.|.|
plant   102 NGRQIRVNLATERSSAPR--SSFGG-GGGYGGGGGGG 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rox8NP_732944.2 RRM1_TIA1_like 9..80 CDD:409788
RRM2_TIA1_like 96..170 CDD:409789 28/72 (39%)
RRM_SF 221..292 CDD:473069
GRP4NP_189025.1 PLN03134 1..122 CDD:178680 33/86 (38%)
Blue background indicates that the domain is not in the aligned region.

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