Sequence 1: | NP_001262897.1 | Gene: | Rox8 / 42848 | FlyBaseID: | FBgn0005649 | Length: | 470 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_997793.1 | Gene: | tia1 / 793165 | ZFINID: | ZDB-GENE-030131-1506 | Length: | 386 | Species: | Danio rerio |
Alignment Length: | 470 | Identity: | 189/470 - (40%) |
---|---|---|---|
Similarity: | 248/470 - (52%) | Gaps: | 97/470 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCK-IIREPGNDPYAFIEYSNYQAATTALTA 64
Fly 65 MNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRD 129
Fly 130 PHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGG 194
Fly 195 PGNGSGVKGSQRH-TFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKG 258
Fly 259 FSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGDNSANNLNAAAAAAAASANVAAVAAA 323
Fly 324 NAAVAAGAGMPGQMMTQQQIAAATGAAIPGQMMTPQQ----IAAQYPYAYQQMGYWYPPATYPTT 384
Fly 385 QMQTQYMQQGYYPYAYPTSAQQAGGVPCIQFSAAGYRMVPPNVAWGVPGTVVPGVTAAAASAAAA 449
Fly 450 ANGS-LAPQMMYSAA 463 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rox8 | NP_001262897.1 | ELAV_HUD_SF | 5..274 | CDD:273741 | 142/270 (53%) |
RRM1_TIA1_like | 9..80 | CDD:240798 | 36/71 (51%) | ||
RRM2_TIA1_like | 96..170 | CDD:240799 | 49/73 (67%) | ||
RRM3_TIA1_like | 221..294 | CDD:240800 | 34/72 (47%) | ||
tia1 | NP_997793.1 | ELAV_HUD_SF | 6..270 | CDD:273741 | 145/284 (51%) |
RRM1_TIA1 | 9..82 | CDD:241059 | 37/72 (51%) | ||
RRM2_TIA1 | 95..174 | CDD:241062 | 52/78 (67%) | ||
RRM3_TIA1 | 204..277 | CDD:241065 | 35/73 (48%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 102 | 1.000 | Domainoid score | I6775 |
eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 306 | 1.000 | Inparanoid score | I2618 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1066369at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000924 | |
OrthoInspector | 1 | 1.000 | - | - | otm25634 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103013 | |
Panther | 1 | 1.100 | - | - | O | PTHR10352 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1842 |
SonicParanoid | 1 | 1.000 | - | - | X831 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.860 |