Protein Alignment Rox8 and trnau1apb

DIOPT Version :9

• Sequence 1: NP_001262897.1
• Gene: Rox8 / 42848
• FlyBaseID: FBgn0005649
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_001025137.2
• Gene: trnau1apb / 791478
• ZFINID: ZDB-GENE-040426-2386
• Length: 316
• Species: Danio rerio
• Alignment Length: 330
• Identity: 74/330 - (22%)
• Similarity: 130/330 - (39%)
• Gaps: 82/330 - (24%)

  Fly     8 TLYVGNLDSSVSEDLLIALFSTMGPVK-SCKIIRE---PGNDPYAFIEYSNYQAATTALTAMNKR 68
            :|::|:||..:.|:.:...|||||... ..|||..   .|:..|.|:|.::..:....:..:|.:
Zfish     7 SLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRCVQRLNGK 71

  Fly    69 LF----LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAF-APFGEISNCRIVR 128
            |.    ..::.|:|:||. |.:|:.  .....:|||||:.|::...|.:.| ..|......::|.
Zfish    72 LVPGSNPPRKFKLNYATY-GKRPEP--GPEFSVFVGDLTSEVDDYQLHQFFLKKFPSCKGAKVVT 133

  Fly   129 DPHTMKSKGYAFVSFVKKAEAENAIQA-MNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMG 192
            ||:. .|:||.||.|..:.|.:.|::. .|...:|.:.||.:.:..|
Zfish   134 DPYG-NSRGYGFVKFSDENEQKKALEEFQNASGLGGKPIRISIAVNK------------------ 179

  Fly   193 GGPGNGSGVKGSQRHTFEEVYNQ---SSPTNT-------TVYCG---GF---------------- 228
               ||.:....:|.:|:...|.|   ..|.|:       ..|.|   |:
Zfish   180 ---GNKASTYHNQNNTYNTNYQQQYYQQPYNSYYPQWGYDQYSGYNYGYNPYAAPPPMMGPPPPM 241

  Fly   229 -----PPNVISDDLMH--KHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNL 286
                 ||::......|  ...|:..|.:|.....|         .:|.....:|  .:.|::.:|
Zfish   242 GMPPMPPDMQGSTEAHDGTEEVEEDPSEDPNPQVD---------VEELNRQYME--RSEELYDSL 295

  Fly   287 VKCFW 291
            ::|.|
Zfish   296 MECHW 300

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_001262897.1	ELAV_HUD_SF	5..274	CDD:273741	69/311 (22%)
		RRM1_TIA1_like	9..80	CDD:240798	21/78 (27%)
		RRM2_TIA1_like	96..170	CDD:240799	24/75 (32%)
		RRM3_TIA1_like	221..294	CDD:240800	16/104 (15%)
trnau1apb	NP_001025137.2	RRM1_SECp43	7..90	CDD:241054	23/83 (28%)
		RRM2_SECp43	98..179	CDD:241056	24/81 (30%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	239..285		8/54 (15%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1842
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.940