| Sequence 1: | NP_001262897.1 | Gene: | Rox8 / 42848 | FlyBaseID: | FBgn0005649 | Length: | 470 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_003080.2 | Gene: | SNRNP70 / 6625 | HGNCID: | 11150 | Length: | 437 | Species: | Homo sapiens |
| Alignment Length: | 220 | Identity: | 52/220 - (23%) |
|---|---|---|---|
| Similarity: | 87/220 - (39%) | Gaps: | 51/220 - (23%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 23 LIALFSTMGPVKSC----KIIREP-GNDPYAFI-----EYSNYQAATTALTAMNKRLFLEK---- 73
Fly 74 -----------EIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIV 127
Fly 128 RDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSI-------RT--NWSTRKLPPPREPSK 183
Fly 184 GGGQGGGMGGGPGNGSGVKGSQRHT 208 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rox8 | NP_001262897.1 | ELAV_HUD_SF | 5..274 | CDD:273741 | 52/220 (24%) |
| RRM1_TIA1_like | 9..80 | CDD:240798 | 17/81 (21%) | ||
| RRM2_TIA1_like | 96..170 | CDD:240799 | 19/82 (23%) | ||
| RRM3_TIA1_like | 221..294 | CDD:240800 | |||
| SNRNP70 | NP_003080.2 | U1snRNP70_N | 3..93 | CDD:403437 | 19/86 (22%) |
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 48..79 | 3/30 (10%) | |||
| Required for interaction with U1 RNA. /evidence=ECO:0000269|PubMed:2467746 | 92..202 | 29/121 (24%) | |||
| RRM_snRNP70 | 102..187 | CDD:409682 | 19/84 (23%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 187..437 | 12/39 (31%) | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||