DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rox8 and SRSF5

DIOPT Version :10

Sequence 1:NP_732944.2 Gene:Rox8 / 42848 FlyBaseID:FBgn0005649 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_008856.2 Gene:SRSF5 / 6430 HGNCID:10787 Length:272 Species:Homo sapiens


Alignment Length:222 Identity:36/222 - (16%)
Similarity:84/222 - (37%) Gaps:65/222 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNKRLFLEK 73
            :::|.|:.:..|..:...|...|.::...:.|     .:.|:|:.:.:.|..|:..::.:....:
Human     6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLKR-----GFGFVEFEDPRDADDAVYELDGKELCSE 65

  Fly    74 EIKVNWATS---------------PGNQPKTD------ISSHHHIFVGDLSPEIETETLREAFAP 117
            .:.:..|.:               ...:|:.|      :.:.:.:.|.:||..:..:.|::....
Human    66 RVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQ 130

  Fly   118 FGEISNCRIVRDPHTMK-SKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREP 181
            .||::    ..|.|..| ::|  .|.|....:.:|||:.::|:.|..|.|:.             
Human   131 AGEVT----FADAHRPKLNEG--VVEFASYGDLKNAIEKLSGKEINGRKIKL------------- 176

  Fly   182 SKGGGQGGGMGGGPGNGSGVKGSQRHT 208
                               ::||:||:
Human   177 -------------------IEGSKRHS 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rox8NP_732944.2 RRM1_TIA1_like 9..80 CDD:409788 10/70 (14%)
RRM2_TIA1_like 96..170 CDD:409789 19/74 (26%)
RRM_SF 221..292 CDD:473069
SRSF5NP_008856.2 RRM1_SRSF5 5..74 CDD:410008 11/72 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..105 2/31 (6%)
RRM2_SRSF5 99..179 CDD:410158 19/117 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..272 5/43 (12%)
Blue background indicates that the domain is not in the aligned region.

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