DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rox8 and myef2

DIOPT Version :9

Sequence 1:	NP_001262897.1	Gene:	Rox8 / 42848	FlyBaseID:	FBgn0005649	Length:	470	Species:	Drosophila melanogaster
Sequence 2:	NP_001032500.1	Gene:	myef2 / 641483	ZFINID:	ZDB-GENE-051120-114	Length:	557	Species:	Danio rerio

Alignment Length:	119	Identity:	38/119 - (31%)
Similarity:	54/119 - (45%)	Gaps:	12/119 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly    97 IFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWI 161
            |||.:|..::..:.|:|.|...|.:....:..|... ||:|...|:|.:..||..||...|||.:
Zfish   214 IFVANLDFKVGWKKLKEVFGMAGTVRRADVKEDKDG-KSRGMGTVTFEQPLEAVQAISMFNGQML 277

  Fly   162 GSRSIRTNWSTRKLPP------PREPSKGGGQGG-GMGGGPG----NGSGVKGS 204
            ..|.:......:.|||      .:.|....|.|| |||.|||    |.:.:.||
Zfish   278 FDRQMHVKMDDKSLPPDDFRPVEKSPQLPRGLGGIGMGLGPGGQPINANCLSGS 331

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_001262897.1	ELAV_HUD_SF	5..274	CDD:273741	38/119 (32%)
		RRM1_TIA1_like	9..80	CDD:240798
		RRM2_TIA1_like	96..170	CDD:240799	22/72 (31%)
		RRM3_TIA1_like	221..294	CDD:240800
myef2	NP_001032500.1	RRM1_MYEF2	82..157	CDD:241102
		RRM2_hnRNPM_like	214..287	CDD:240832	22/73 (30%)
		RRM	<436..>557	CDD:223796
		RRM3_MYEF2	481..557	CDD:241106
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910