Protein Alignment Rox8 and hnrnpd

DIOPT Version :10

• Sequence 1: NP_732944.2
• Gene: Rox8 / 42848
• FlyBaseID: FBgn0005649
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_001025523.1
• Gene: hnrnpd / 594903
• XenbaseID: XB-GENE-988375
• Length: 295
• Species: Xenopus tropicalis
• Alignment Length: 390
• Identity: 76/390 - (19%)
• Similarity: 131/390 - (33%)
• Gaps: 155/390 - (39%)

  Fly    56 QAATTALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
            :|...|.||..:.....:.:|::.:.:..::.|        :|:|.||.:...:.|::.|:.|||
 Frog     7 EAMMEATTAETEETGQNEGVKIDASKTEEDEGK--------MFIGGLSWDTTKKDLKDYFSKFGE 63

  Fly   121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEA-----ENAIQAMNGQWIG---SRSIRTNWSTRKLPP 177
            :.:|.:..||.|.:|:|:.||.| |::|.     |.....:||:.|.   :::::|
 Frog    64 VVDCTLKLDPITGRSRGFGFVLF-KESEGVDKVMEQKEHKLNGKVIDPKRAKAMKT--------- 118

  Fly   178 PREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHF 242
             :||.|                                      .::.||..|:. .::.:.::|
 Frog   119 -KEPVK--------------------------------------KIFVGGLSPDT-PEEKIREYF 143

  Fly   243 VQFGPIQ------DVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKC------------ 289
            ..||.|:      |.:..|.:||.||.|..::.....:|..:::.   .|.||
 Frog   144 GTFGEIEAIELPMDNKTNKRRGFCFITFKEEDPVKKIMEKKYHNV---GLSKCEIKVALSKEQYQ 205

  Fly   290 ---FWGKENGGDNSANNLNAAAAAAAASANVAAVAAANAAVAAGAGMPGQMMTQQQIAAATGAAI 351
               .||...||.:|.                          ..|.|...|..:|
 Frog   206 QQQQWGTRGGGSSSR--------------------------PRGRGGVSQTWSQ----------- 233

  Fly   352 PGQMMTPQQIAAQYPYAYQQMGYWYPPATYPTTQMQTQ-------YMQQGYYPYAY-PTSAQQAG 408
                            .|.  .||.|  :|.:.....|       |...||..|.| ..|.||:|
 Frog   234 ----------------GYS--NYWNP--SYSSYGYNNQGYGGYGNYDYSGYNYYGYGDYSNQQSG 278

  Fly   409  408
             Frog   279  278

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_732944.2	RRM1_TIA1_like	9..80	CDD:409788	5/23 (22%)
		RRM2_TIA1_like	96..170	CDD:409789	25/81 (31%)
		RRM_SF	221..292	CDD:473069	18/91 (20%)
hnrnpd	NP_001025523.1	RRM1_hnRNPD	40..113	CDD:410150	24/73 (33%)
		RRM2_hnRNPD	124..198	CDD:241027	18/77 (23%)