Protein Alignment Rox8 and rbm4.2

DIOPT Version :10

• Sequence 1: NP_732944.2
• Gene: Rox8 / 42848
• FlyBaseID: FBgn0005649
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_955971.2
• Gene: rbm4.2 / 557528
• ZFINID: ZDB-GENE-030131-3019
• Length: 384
• Species: Danio rerio
• Alignment Length: 300
• Identity: 71/300 - (23%)
• Similarity: 111/300 - (37%)
• Gaps: 83/300 - (27%)

  Fly     9 LYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNKRLFLEK 73
            :::|||..:.:.|.|.:|||..|.||.|.:::.     |.|:...:.:.|..|:..::     ..
Zfish     4 IFIGNLSPTSTADDLRSLFSEFGIVKECDVLKN-----YGFVHMDSKKEAEAAIRKLH-----HY 58

  Fly    74 EIK---VNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKS 135
            |:|   :|...|.| :|:.....|    |.::|.....:.||..|..:|.:..|.||:|
Zfish    59 ELKGQAINVELSKG-KPRGSTKLH----VSNISSGCTNQELRAKFEEYGPVVECDIVKD------ 112

  Fly   136 KGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKL---PPPREP---------------- 181
              ||||...:..:|..||..:.......:.|:...||.:|   |...:.
Zfish   113 --YAFVHMERMDDAMEAISGLENTTFQGKLIKVQLSTSRLRTAPGMGDQTGCYICGEQGHWSKDC 175

  Fly   182 --SKGGGQGGGMG---------GGPGNGSGVKG------------------SQRHTFEEVYNQSS 217
              |:.|..|||||         |||..|.|..|                  |:|.::.|...:..
Zfish   176 RHSQNGSYGGGMGGYPSRGPPRGGPSYGMGGPGGHPSRGYPAGPLPPPPPMSRRPSYGEYGAEPR 240

  Fly   218 PTNTTVYCGGFP--PNVISDDLMHKHFVQFGPIQDVRVFK 255
            ....|....|:|  |.|...|       :||.|.....|:
Zfish   241 ERYLTRVPTGYPERPPVYERD-------RFGSIDYYEKFR 273

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_732944.2	RRM1_TIA1_like	9..80	CDD:409788	19/73 (26%)
		RRM2_TIA1_like	96..170	CDD:409789	18/73 (25%)
		RRM_SF	221..292	CDD:473069	10/36 (28%)
rbm4.2	NP_955971.2	None