Sequence 1: | NP_001262897.1 | Gene: | Rox8 / 42848 | FlyBaseID: | FBgn0005649 | Length: | 470 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_060316.1 | Gene: | TRNAU1AP / 54952 | HGNCID: | 30813 | Length: | 287 | Species: | Homo sapiens |
Alignment Length: | 316 | Identity: | 80/316 - (25%) |
---|---|---|---|
Similarity: | 132/316 - (41%) | Gaps: | 78/316 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 TLYVGNLDSSVSEDLLIALFSTMG-PVKSCKIIRE-----PGNDPYAFIEYSNYQAATTALTAMN 66
Fly 67 KR----LFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCR-- 125
Fly 126 -IVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQ-WIGSRSIRTNWSTRKLPPPREPSKGGGQG 188
Fly 189 GGMGGGPGNGSGVKGSQRHTFEEVYNQ------------SSPTNTTVYCGGFPPNVISDDLMHKH 241
Fly 242 FVQFGPIQD-VRVFKDKGFSFI-----KFVTKEAAAHAIEHTHNSEVHGNLVKCFW 291 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rox8 | NP_001262897.1 | ELAV_HUD_SF | 5..274 | CDD:273741 | 75/297 (25%) |
RRM1_TIA1_like | 9..80 | CDD:240798 | 24/80 (30%) | ||
RRM2_TIA1_like | 96..170 | CDD:240799 | 27/77 (35%) | ||
RRM3_TIA1_like | 221..294 | CDD:240800 | 14/77 (18%) | ||
TRNAU1AP | NP_060316.1 | RRM1_SECp43 | 4..87 | CDD:410022 | 26/85 (31%) |
RRM2_SECp43 | 95..176 | CDD:410024 | 27/83 (33%) | ||
Trnau1ap | <205..284 | CDD:407550 | 15/85 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1842 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.940 |