Protein Alignment Rox8 and TRNAU1AP

DIOPT Version :9

• Sequence 1: NP_001262897.1
• Gene: Rox8 / 42848
• FlyBaseID: FBgn0005649
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_060316.1
• Gene: TRNAU1AP / 54952
• HGNCID: 30813
• Length: 287
• Species: Homo sapiens
• Alignment Length: 316
• Identity: 80/316 - (25%)
• Similarity: 132/316 - (41%)
• Gaps: 78/316 - (24%)

  Fly     8 TLYVGNLDSSVSEDLLIALFSTMG-PVKSCKIIRE-----PGNDPYAFIEYSNYQAATTALTAMN 66
            :|::|:|:..:.|:.:...|:||| .|.|.||||.     |..  |.|:|:::...|...|..:|
Human     4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAG--YCFVEFADLATAEKCLHKIN 66

  Fly    67 KR----LFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCR-- 125
            .:    ....|..|:|:||. |.||  |.|..:.:|||||:|:::...|.|.|...  ..:||
Human    67 GKPLPGATPAKRFKLNYATY-GKQP--DNSPEYSLFVGDLTPDVDDGMLYEFFVKV--YPSCRGG 126

  Fly   126 -IVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQ-WIGSRSIRTNWSTRKLPPPREPSKGGGQG 188
             :|.| .|..||||.||.|..:.|.:.|:....|. .:||:.:|.:.:..|....:.
Human   127 KVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASRVKP-------- 182

  Fly   189 GGMGGGPGNGSGVKGSQRHTFEEVYNQ------------SSPTNTTVYCGGFPPNVISDDLMHKH 241
                        |:.||.:::.  |||            ....||..|...:|
Human   183 ------------VEYSQMYSYS--YNQYYQQYQNYYAQWGYDQNTGSYSYSYP------------ 221

  Fly   242 FVQFGPIQD-VRVFKDKGFSFI-----KFVTKEAAAHAIEHTHNSEVHGNLVKCFW 291
              |:|..|. ::.:::.|...:     :....||....:|  .:.|::..|:.|.|
Human   222 --QYGYTQSTMQTYEEVGDDALEDPMPQLDVTEANKEFME--QSEELYDALMDCHW 273

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_001262897.1	ELAV_HUD_SF	5..274	CDD:273741	75/297 (25%)
		RRM1_TIA1_like	9..80	CDD:240798	24/80 (30%)
		RRM2_TIA1_like	96..170	CDD:240799	27/77 (35%)
		RRM3_TIA1_like	221..294	CDD:240800	14/77 (18%)
TRNAU1AP	NP_060316.1	RRM1_SECp43	4..87	CDD:410022	26/85 (31%)
		RRM2_SECp43	95..176	CDD:410024	27/83 (33%)
		Trnau1ap	<205..284	CDD:407550	15/85 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1842
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	2	1.940