Protein Alignment Rox8 and srsf6b

DIOPT Version :10

• Sequence 1: NP_732944.2
• Gene: Rox8 / 42848
• FlyBaseID: FBgn0005649
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_001008732.1
• Gene: srsf6b / 494133
• ZFINID: ZDB-GENE-041219-1
• Length: 355
• Species: Danio rerio
• Alignment Length: 196
• Identity: 41/196 - (20%)
• Similarity: 79/196 - (40%)
• Gaps: 22/196 - (11%)

  Fly    97 IFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWI 161
            :::|.||..:..:.::..|..:|::.        .|....||.||.|....:|::|:..:||:.:
Zfish     4 VYIGKLSYHVREKDIQRFFGGYGKLM--------ETDLKNGYGFVEFEDTRDADDAVYELNGKEL 60

  Fly   162 -GSRSIRTNWSTRKLPPPREPSKG-GGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVY 224
             |.|.|        :...|.|.:. .|.|||.||..|..:....|:..:..:.|.....|...:.
Zfish    61 CGERVI--------VEHARGPRRDRDGYGGGYGGFGGRSNSGYSSRSRSGRDKYGPPVRTEYRLI 117

  Fly   225 CGGFPPNVISDDLMHKHFV-QFGPIQDVRVFKDK-GFSFIKFVTKEAAAHAIEHTHNSEVHGNLV 287
            ...........||  |.|: |.|.:......|:: ....|:|.:......|::....::::|..:
Zfish   118 VENLSSRCSWQDL--KDFMRQAGEVTYADAHKERTNEGVIEFRSHSDMRRALDKLDVTDINGRKI 180

  Fly   288 K 288
            :
Zfish   181 R 181

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_732944.2	RRM1_TIA1_like	9..80	CDD:409788
		RRM2_TIA1_like	96..170	CDD:409789	18/73 (25%)
		RRM_SF	221..292	CDD:473069	11/70 (16%)
srsf6b	NP_001008732.1	RRM1_SRSF6	1..72	CDD:410009	18/83 (22%)
		RRM2_SRSF6	114..186	CDD:410159	11/70 (16%)