Protein Alignment Rox8 and Hrb87F

DIOPT Version :10

• Sequence 1: NP_732944.2
• Gene: Rox8 / 42848
• FlyBaseID: FBgn0005649
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_476806.2
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Alignment Length: 266
• Identity: 67/266 - (25%)
• Similarity: 98/266 - (36%)
• Gaps: 88/266 - (33%)

  Fly     2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREP---GNDPYAFIEYSNYQAATTALT 63
            :..|.:.|::|.||...::|.|.|.|...|.:....::::|   .:..:.||.||.......|..
  Fly    19 EPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQN 83

  Fly    64 AMNKRLFLEKEIKVNWATSPGNQ--PKTDISSHH------HIFVGDLSPEIETETLREAFAPFGE 120
            |        :..|::..|....:  |:.:|.|.:      .:|||.|..:.:.|.|||.|..||:
  Fly    84 A--------RPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQ 140

  Fly   121 ISNCRIVRDPHTMKSKGYAFVSF-----------------------VKKAEAENAIQAMNGQWIG 162
            |.:..||.|..|.|.:|:||:.|                       ||||.|:..:....|.  |
  Fly   141 IVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQGGG--G 203

  Fly   163 SRSIRTNWSTRKLPPPREPSKGG----GQGGG-----------------------------MGGG 194
            .|.           .||...:||    |||||                             .|||
  Fly   204 GRG-----------GPRAGGRGGQGDRGQGGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGG 257

  Fly   195 PGNGSG 200
            .|.|||
  Fly   258 QGGGSG 263

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_732944.2	RRM1_TIA1_like	9..80	CDD:409788	17/73 (23%)
		RRM2_TIA1_like	96..170	CDD:409789	29/96 (30%)
		RRM_SF	221..292	CDD:473069
Hrb87F	NP_476806.2	RRM1_hnRNPA_like	25..102	CDD:409992	18/84 (21%)
		RRM_SF	116..188	CDD:473069	21/71 (30%)