Sequence 1: | NP_001262897.1 | Gene: | Rox8 / 42848 | FlyBaseID: | FBgn0005649 | Length: | 470 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001163754.3 | Gene: | trv / 43362 | FlyBaseID: | FBgn0085391 | Length: | 651 | Species: | Drosophila melanogaster |
Alignment Length: | 508 | Identity: | 191/508 - (37%) |
---|---|---|---|
Similarity: | 244/508 - (48%) | Gaps: | 143/508 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 28 STMGPVKS--CKI-IREPGNDP----YAFIEYSNYQAATTALTAMNKRL--------FLEKEIKV 77
Fly 78 N-WATSP-----------------GNQPKTD----------ISSHHHIFVGDLSPEIETETLREA 114
Fly 115 FAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPR 179
Fly 180 EPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPP--NVISDDLMHKHF 242
Fly 243 VQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGDNSANNLNAA 307
Fly 308 AAAAAASANVAAVAAANAAVAAGAGMPGQMMTQQQIAAATGAAIPGQMMTPQQIAAQYPYAYQQM 372
Fly 373 GYWYPPA-TYPTTQ---------------MQTQYMQ--QGY-------YPYAY-------PTSAQ 405
Fly 406 QAGGVPCIQFSAAGYRMVPPNVAWGVPGTVVPGVTAAAASAAAAANGSLAPQM 458 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rox8 | NP_001262897.1 | ELAV_HUD_SF | 5..274 | CDD:273741 | 125/290 (43%) |
RRM1_TIA1_like | 9..80 | CDD:240798 | 15/67 (22%) | ||
RRM2_TIA1_like | 96..170 | CDD:240799 | 59/73 (81%) | ||
RRM3_TIA1_like | 221..294 | CDD:240800 | 36/74 (49%) | ||
trv | NP_001163754.3 | RRM2_TIA1_like | 313..387 | CDD:240799 | 59/73 (81%) |
RRM3_TIA1_like | 416..491 | CDD:240800 | 36/74 (49%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 77 | 1.000 | Domainoid score | I3083 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 189 | 1.000 | Inparanoid score | I1394 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D100171at50557 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000924 | |
OrthoInspector | 1 | 1.000 | - | - | mtm1150 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR10352 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X831 | |
8 | 8.070 |