| Sequence 1: | NP_001262897.1 | Gene: | Rox8 / 42848 | FlyBaseID: | FBgn0005649 | Length: | 470 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_649899.1 | Gene: | rump / 41138 | FlyBaseID: | FBgn0267790 | Length: | 632 | Species: | Drosophila melanogaster |
| Alignment Length: | 404 | Identity: | 74/404 - (18%) |
|---|---|---|---|
| Similarity: | 137/404 - (33%) | Gaps: | 116/404 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 94 HHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNG 158
Fly 159 QWIGSR--SIRTNWSTRKLPPPRE----PSKGGGQGGGMG---------------GGPGN----G 198
Fly 199 SGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFG-----------PIQDVR 252
Fly 253 VFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGG------DNSANNLNAAAAAA 311
Fly 312 AASANV--AAVAAANAAVAAGAGMPGQMMTQQQIAAATGAAIPGQMMTPQQIAAQYPYAYQQMGY 374
Fly 375 WYPPATYPTTQMQTQYMQQGYYPYAYPTSAQQAGGVPCIQFSAAGYRMVPPNVAWGVPGTVVPGV 439
Fly 440 TAAAASAAAAANGS 453 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rox8 | NP_001262897.1 | ELAV_HUD_SF | 5..274 | CDD:273741 | 43/215 (20%) |
| RRM1_TIA1_like | 9..80 | CDD:240798 | |||
| RRM2_TIA1_like | 96..170 | CDD:240799 | 17/75 (23%) | ||
| RRM3_TIA1_like | 221..294 | CDD:240800 | 13/83 (16%) | ||
| rump | NP_649899.1 | PABP-1234 | 48..435 | CDD:130689 | 44/226 (19%) |
| RRM1_hnRNPM_like | 58..133 | CDD:240831 | |||
| RRM2_hnRNPM_like | 234..307 | CDD:240832 | 17/73 (23%) | ||
| RRM | <543..>631 | CDD:223796 | 5/20 (25%) | ||
| RRM_SF | 565..630 | CDD:302621 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||