Protein Alignment Rox8 and hnrnpdl

DIOPT Version :10

• Sequence 1: NP_732944.2
• Gene: Rox8 / 42848
• FlyBaseID: FBgn0005649
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_001315423.1
• Gene: hnrnpdl / 406701
• ZFINID: ZDB-GENE-040426-2717
• Length: 296
• Species: Danio rerio
• Alignment Length: 232
• Identity: 62/232 - (26%)
• Similarity: 97/232 - (41%)
• Gaps: 36/232 - (15%)

  Fly     9 LYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREP---GNDPYAFIEYSNYQAATTALT----AMN 66
            :::|.|....|:..|....|..|.|..|.|..:|   .:..:.|:.:.:.::....|.    .::
Zfish    32 MFIGGLSWDTSKKDLTDYLSRFGEVLDCTIKTDPLTGRSRGFGFVLFKDAESVDRVLELTEHKLD 96

  Fly    67 KRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPH 131
            .:|...|..|......|   ||       .:|||.|||:|..|.|||.|..:|||.:..:..|..
Zfish    97 GKLIDPKRAKAIKGKEP---PK-------KVFVGGLSPDITEEQLREYFGVYGEIESIELPTDTK 151

  Fly   132 TMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE-----PSKGGGQGGGM 191
            |.:.:|:.||:|..:...:..::....| |||.....     |:..|:|     .::..|.|||.
Zfish   152 TNERRGFCFVTFALEEPVQKLLENRYHQ-IGSGKCEI-----KVAQPKEVYRQQQNRDRGFGGGR 210

  Fly   192 GGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGF 228
            ||..|.|...:|     |.:.||.....|   |.||:
Zfish   211 GGFRGRGGRGQG-----FNQGYNNYYGQN---YGGGY 239

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_732944.2	RRM1_TIA1_like	9..80	CDD:409788	15/77 (19%)
		RRM2_TIA1_like	96..170	CDD:409789	25/73 (34%)
		RRM_SF	221..292	CDD:473069	3/8 (38%)
hnrnpdl	NP_001315423.1	RRM_SF	31..106	CDD:473069	14/73 (19%)
		RRM2_hnRPDL	116..190	CDD:409998	26/79 (33%)