Protein Alignment Rox8 and srsf1a

DIOPT Version :10

• Sequence 1: NP_732944.2
• Gene: Rox8 / 42848
• FlyBaseID: FBgn0005649
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_998180.2
• Gene: srsf1a / 406288
• ZFINID: ZDB-GENE-040426-1950
• Length: 257
• Species: Danio rerio
• Alignment Length: 199
• Identity: 59/199 - (29%)
• Similarity: 90/199 - (45%)
• Gaps: 31/199 - (15%)

  Fly    92 SSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKG---YAFVSFVKKAEAENAI 153
            |:...|:||:|.|:|.|:.:.:.|..:|.|      ||......:|   :|||.|....:||:|:
Zfish    12 SNDCRIYVGNLPPDIRTKDVEDVFYKYGAI------RDIDLKNRRGGPPFAFVEFEDPRDAEDAV 70

  Fly   154 QAMNGQWIGSRSIRTNWSTRKLPPPREPSKG---GGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQ 215
            .|.:|.......:|..:       ||. .:|   ||.|||.|||.|.|.|..|:.|..:
Zfish    71 YARDGYDYDGYRLRVEF-------PRS-GRGMGRGGFGGGGGGGGGGGGGGGGAPRGRY------ 121

  Fly   216 SSPTNTTVY---CGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHT 277
            ..|:..:.|   ..|.||:....|| ..|..:.|.:....||:| |...::||.||...:|:...
Zfish   122 GPPSRRSEYRVIVSGLPPSGSWQDL-KDHMREAGDVCYADVFRD-GTGVVEFVRKEDMTYAVRKL 184

  Fly   278 HNSE 281
            .|::
Zfish   185 DNTK 188

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_732944.2	RRM1_TIA1_like	9..80	CDD:409788
		RRM2_TIA1_like	96..170	CDD:409789	23/76 (30%)
		RRM_SF	221..292	CDD:473069	18/64 (28%)
srsf1a	NP_998180.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	94..126		14/37 (38%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	202..257