DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rox8 and Zcrb1

DIOPT Version :10

Sequence 1:NP_732944.2 Gene:Rox8 / 42848 FlyBaseID:FBgn0005649 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_001030112.1 Gene:Zcrb1 / 362990 RGDID:1309851 Length:217 Species:Rattus norvegicus


Alignment Length:86 Identity:24/86 - (27%)
Similarity:48/86 - (55%) Gaps:7/86 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 SPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD------KGFSFIKFVTKEAAAHAIE 275
            :|:.:|||....|.::.::|| ::.|.::|.:..|.:.||      ||.:||.|:.|::|.:...
  Rat     6 APSKSTVYVSNLPFSLTNNDL-YRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALNCTR 69

  Fly   276 HTHNSEVHGNLVKCFWGKENG 296
            ..:|.::.|.::|.....:||
  Rat    70 AINNKQLFGRVIKASIAIDNG 90

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rox8NP_732944.2 RRM1_TIA1_like 9..80 CDD:409788
RRM2_TIA1_like 96..170 CDD:409789
RRM_SF 221..292 CDD:473069 21/76 (28%)
Zcrb1NP_001030112.1 RRM_ZCRB1 9..84 CDD:409827 21/75 (28%)
PTZ00368 <97..123 CDD:173561
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..217
Blue background indicates that the domain is not in the aligned region.

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