Sequence 1: | NP_001262897.1 | Gene: | Rox8 / 42848 | FlyBaseID: | FBgn0005649 | Length: | 470 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001013211.1 | Gene: | Tial1 / 361655 | RGDID: | 1595845 | Length: | 392 | Species: | Rattus norvegicus |
Alignment Length: | 472 | Identity: | 181/472 - (38%) |
---|---|---|---|
Similarity: | 235/472 - (49%) | Gaps: | 112/472 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIRE------------------PGNDPYA 48
Fly 49 FIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLRE 113
Fly 114 AFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPP 178
Fly 179 REPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFV 243
Fly 244 QFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGDNSANNLNAAA 308
Fly 309 AAAAASANVAAVAAANAAVAAGAGMPGQMMTQQQIAAATGAAIPGQMMTPQQIAAQYPYAYQQMG 373
Fly 374 YWYPPATYPTTQMQTQYMQQG-----YYPYAYPTSAQQAGGVPCIQFSA--AGYRMVPPNVAWGV 431
Fly 432 PGTVVPGVTAAAASAAA 448 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rox8 | NP_001262897.1 | ELAV_HUD_SF | 5..274 | CDD:273741 | 141/286 (49%) |
RRM1_TIA1_like | 9..80 | CDD:240798 | 39/88 (44%) | ||
RRM2_TIA1_like | 96..170 | CDD:240799 | 48/73 (66%) | ||
RRM3_TIA1_like | 221..294 | CDD:240800 | 34/72 (47%) | ||
Tial1 | NP_001013211.1 | RRM1_TIAR | 10..107 | CDD:410028 | 45/97 (46%) |
RRM2_TIAR | 113..192 | CDD:410029 | 51/78 (65%) | ||
RRM3_TIAR | 222..294 | CDD:241064 | 34/72 (47%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 99 | 1.000 | Domainoid score | I6881 |
eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H87796 | |
Inparanoid | 1 | 1.050 | 304 | 1.000 | Inparanoid score | I2571 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1066369at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000924 | |
OrthoInspector | 1 | 1.000 | - | - | otm44540 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103013 | |
Panther | 1 | 1.100 | - | - | O | PTHR10352 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X831 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.830 |