Protein Alignment Rox8 and srsf5a

DIOPT Version :9

• Sequence 1: NP_001262897.1
• Gene: Rox8 / 42848
• FlyBaseID: FBgn0005649
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_957161.1
• Gene: srsf5a / 335396
• ZFINID: ZDB-GENE-030131-7336
• Length: 259
• Species: Danio rerio
• Alignment Length: 282
• Identity: 52/282 - (18%)
• Similarity: 107/282 - (37%)
• Gaps: 60/282 - (21%)

  Fly    97 IFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWI 161
            :|:|.|||......:.:.|..:|.|....:        ..|:.||.|....:|::|:..:||:.:
Zfish     6 VFIGRLSPHARERDVEKFFKGYGRIREINL--------KNGFGFVEFDDYRDADDAVYELNGKEL 62

  Fly   162 GSRSIRTNWSTRKLPPPREPSKGGGQGGGMG---------------GGPGNGSGVKGSQRHTFEE 211
            .|..:....:..:        :|.|.|.|||               ||...|..|:...|...|.
Zfish    63 CSERVTIEHARSR--------RGRGGGPGMGGRFSPRFGGYRQSRSGGSRYGPPVRTEHRIIVEN 119

  Fly   212 VYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDV---RVFKDKGFSFIKFVTKEAAAHA 273
            :.::.|..:.             .|||.|    .|.:..|   |..|::|  .::|.:.....:|
Zfish   120 LSSRISWQDL-------------KDLMRK----VGEVTFVDAHRTKKNEG--VVEFASHSDMKNA 165

  Fly   274 IEHTHNSEVHGNLVKCFWGKENGGDNSANNLNAAAAAAAASANVAAVAAANAAVAAGAGMPGQMM 338
            ||....::::|..:|.:       ::...|.:.:.:.:.:|:...:.:.:.:..........:.:
Zfish   166 IEKLDGTDLNGRKLKLY-------EDRKRNRSRSRSRSRSSSRSRSPSRSRSPERGSKRSRSRSL 223

  Fly   339 TQQQIAAATGAAIPGQMMTPQQ 360
            ::.....:|....|.:..|||:
Zfish   224 SRTPEKKSTSNRSPSRSPTPQR 245

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_001262897.1	ELAV_HUD_SF	5..274	CDD:273741	40/194 (21%)
		RRM1_TIA1_like	9..80	CDD:240798
		RRM2_TIA1_like	96..170	CDD:240799	17/72 (24%)
		RRM3_TIA1_like	221..294	CDD:240800	15/75 (20%)
srsf5a	NP_957161.1	RRM1_SRSF4_like	5..72	CDD:240783	17/73 (23%)
		RRM2_SRSF4_like	113..184	CDD:241044	18/96 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900