Protein Alignment Rox8 and elav

DIOPT Version :10

• Sequence 1: NP_732944.2
• Gene: Rox8 / 42848
• FlyBaseID: FBgn0005649
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_525033.1
• Gene: elav / 31000
• FlyBaseID: FBgn0260400
• Length: 483
• Species: Drosophila melanogaster
• Alignment Length: 343
• Identity: 90/343 - (26%)
• Similarity: 136/343 - (39%)
• Gaps: 85/343 - (24%)

  Fly     9 LYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGN---DP-------------YAFIEYSNYQA 57
            |.|..|..:::||.:.:|||::|.::|.|:||:...   ||             |.|:.|...|.
  Fly   151 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQD 215

  Fly    58 ATTALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEIS 122
            |..|:..:|......|.|||::|     :|.:|.....:::|..|...:..:.|...|||||.|.
  Fly   216 AEQAVNVLNGLRLQNKTIKVSFA-----RPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAII 275

  Fly   123 NCRIVRDP-HTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGS-------RSIRTNWSTRKLPPPR 179
            ..||:::. :..::||..|:.|.|:.||..||.|:||....|       :...|..||.|:..|:
  Fly   276 TSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQ 340

  Fly   180 EP-------------------SKGGGQGGGMGGG------PGNGSGVKGSQRHTFEE-------- 211
            .|                   :||..:...|.|.      | ||.|...:...|...
  Fly   341 LPAFLNPQLVRRIGGAMHTPVNKGLARFSPMAGDMLDVMLP-NGLGAAAAAATTLASGPGGAYPI 404

  Fly   212 -VYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD------KGFSFIKFVTKEA 269
             :||.:..|........|.|              ||.:|.|::.||      ||:.|:.....:.
  Fly   405 FIYNLAPETEEAALWQLFGP--------------FGAVQSVKIVKDPTTNQCKGYGFVSMTNYDE 455

  Fly   270 AAHAIEHTHNSEVHGNLV 287
            ||.|| ...|....||.|
  Fly   456 AAMAI-RALNGYTMGNRV 472

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_732944.2	RRM1_TIA1_like	9..80	CDD:409788	26/86 (30%)
		RRM2_TIA1_like	96..170	CDD:409789	25/81 (31%)
		RRM_SF	221..292	CDD:473069	19/73 (26%)
elav	NP_525033.1	ELAV_HUD_SF	146..483	CDD:273741	90/343 (26%)