Protein Alignment Rox8 and elav

DIOPT Version :9

• Sequence 1: NP_001262897.1
• Gene: Rox8 / 42848
• FlyBaseID: FBgn0005649
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_001245447.1
• Gene: elav / 31000
• FlyBaseID: FBgn0260400
• Length: 483
• Species: Drosophila melanogaster
• Alignment Length: 343
• Identity: 90/343 - (26%)
• Similarity: 136/343 - (39%)
• Gaps: 85/343 - (24%)

  Fly     9 LYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGN---DP-------------YAFIEYSNYQA 57
            |.|..|..:::||.:.:|||::|.::|.|:||:...   ||             |.|:.|...|.
  Fly   151 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQD 215

  Fly    58 ATTALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEIS 122
            |..|:..:|......|.|||::|     :|.:|.....:::|..|...:..:.|...|||||.|.
  Fly   216 AEQAVNVLNGLRLQNKTIKVSFA-----RPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAII 275

  Fly   123 NCRIVRDP-HTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGS-------RSIRTNWSTRKLPPPR 179
            ..||:::. :..::||..|:.|.|:.||..||.|:||....|       :...|..||.|:..|:
  Fly   276 TSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQ 340

  Fly   180 EP-------------------SKGGGQGGGMGGG------PGNGSGVKGSQRHTFEE-------- 211
            .|                   :||..:...|.|.      | ||.|...:...|...
  Fly   341 LPAFLNPQLVRRIGGAMHTPVNKGLARFSPMAGDMLDVMLP-NGLGAAAAAATTLASGPGGAYPI 404

  Fly   212 -VYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD------KGFSFIKFVTKEA 269
             :||.:..|........|.|              ||.:|.|::.||      ||:.|:.....:.
  Fly   405 FIYNLAPETEEAALWQLFGP--------------FGAVQSVKIVKDPTTNQCKGYGFVSMTNYDE 455

  Fly   270 AAHAIEHTHNSEVHGNLV 287
            ||.|| ...|....||.|
  Fly   456 AAMAI-RALNGYTMGNRV 472

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_001262897.1	ELAV_HUD_SF	5..274	CDD:273741	84/328 (26%)
		RRM1_TIA1_like	9..80	CDD:240798	26/86 (30%)
		RRM2_TIA1_like	96..170	CDD:240799	25/81 (31%)
		RRM3_TIA1_like	221..294	CDD:240800	19/73 (26%)
elav	NP_001245447.1	ELAV_HUD_SF	146..483	CDD:273741	90/343 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910