DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rox8 and TRA2A

DIOPT Version :10

Sequence 1:NP_732944.2 Gene:Rox8 / 42848 FlyBaseID:FBgn0005649 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_037425.1 Gene:TRA2A / 29896 HGNCID:16645 Length:282 Species:Homo sapiens


Alignment Length:128 Identity:42/128 - (32%)
Similarity:65/128 - (50%) Gaps:19/128 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 LREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRK- 174
            |||.|:.:|.:|...:|.|..|.:|:|:|||.|.:..:::.|::..||..:..|.||.::|..| 
Human   135 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKR 199

  Fly   175 --LPPP----REPSKGGGQGGGMGGGPGNGSG-----------VKGSQRH-TFEEVYNQSSPT 219
              .|.|    ..|:..||.|||.|||.|.|.|           .:|..|: .::..|.:.||:
Human   200 AHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGRRRDSYYDRGYDRGYDRYEDYDYRYRRRSPS 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rox8NP_732944.2 RRM1_TIA1_like 9..80 CDD:409788
RRM2_TIA1_like 96..170 CDD:409789 21/58 (36%)
RRM_SF 221..292 CDD:473069
TRA2ANP_037425.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..118
RRM_TRA2 118..197 CDD:409798 22/61 (36%)
Linker 198..225 10/26 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..245 14/43 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 260..282 2/3 (67%)
Blue background indicates that the domain is not in the aligned region.

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