DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rox8 and cwf2

DIOPT Version :10

Sequence 1:NP_732944.2 Gene:Rox8 / 42848 FlyBaseID:FBgn0005649 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_593337.1 Gene:cwf2 / 2542531 PomBaseID:SPAC3A12.11C Length:388 Species:Schizosaccharomyces pombe


Alignment Length:97 Identity:27/97 - (27%)
Similarity:44/97 - (45%) Gaps:3/97 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 NTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIE-HTHNSEVH 283
            |.|:|.||..|....::::.:||.::|.|:.:||...:|.:||.::.:..|..|.| ..|.|..|
pombe   173 NYTLYVGGITPTDDIEEIVSRHFAEWGDIERIRVLNSRGIAFITYLNEANAQFAKEAMAHQSLDH 237

  Fly   284 GNLVKCFWG--KENGGDNSANNLNAAAAAAAA 313
            ...:...|.  ..|....:.|.......||.|
pombe   238 DECLNVRWATTDPNPASQARNQRRLEERAANA 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rox8NP_732944.2 RRM1_TIA1_like 9..80 CDD:409788
RRM2_TIA1_like 96..170 CDD:409789
RRM_SF 221..292 CDD:473069 20/71 (28%)
cwf2NP_593337.1 Torus 49..153 CDD:435160
RRM_cwf2 173..247 CDD:409795 22/73 (30%)
Blue background indicates that the domain is not in the aligned region.

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