DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rox8 and Y57G11A.5

DIOPT Version :10

Sequence 1:NP_732944.2 Gene:Rox8 / 42848 FlyBaseID:FBgn0005649 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_502757.2 Gene:Y57G11A.5 / 190364 WormBaseID:WBGene00013293 Length:110 Species:Caenorhabditis elegans


Alignment Length:106 Identity:29/106 - (27%)
Similarity:48/106 - (45%) Gaps:16/106 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNKRLFL 71
            :.:||||:....:|..:.|:||.|||:||..:.:.|..  :||:.:.....|..|:..:|.:...
 Worm    17 RQVYVGNMPFDATEKEIEAVFSVMGPIKSIWMAKRPPG--FAFVTFKRTVHAFDAVKYLNGKKIC 79

  Fly    72 EKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLR 112
            :.|.||...       :.|       |..||...:|.|.|:
 Worm    80 DLEAKVEMC-------EVD-------FKEDLRRRMELENLK 106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rox8NP_732944.2 RRM1_TIA1_like 9..80 CDD:409788 22/70 (31%)
RRM2_TIA1_like 96..170 CDD:409789 6/17 (35%)
RRM_SF 221..292 CDD:473069
Y57G11A.5NP_502757.2 RRM_SF 19..87 CDD:473069 22/69 (32%)
Blue background indicates that the domain is not in the aligned region.

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