Protein Alignment Rox8 and rnp-9

DIOPT Version :10

• Sequence 1: NP_732944.2
• Gene: Rox8 / 42848
• FlyBaseID: FBgn0005649
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_001359585.1
• Gene: rnp-9 / 182350
• WormBaseID: WBGene00007396
• Length: 312
• Species: Caenorhabditis elegans
• Alignment Length: 224
• Identity: 85/224 - (37%)
• Similarity: 120/224 - (53%)
• Gaps: 25/224 - (11%)

  Fly    80 ATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFV 144
            |:.|..:.:.|.|.|.|:||||||.::..|.|:..|..|||:|..:::||..|.|||||.||||.
 Worm    72 ASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFP 136

  Fly   145 KKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTF 209
            .|..|||||..|||:|||.|::||||:.||                        :..:...:.||
 Worm   137 NKQNAENAIAGMNGKWIGKRAVRTNWAARK------------------------NSEENRDKLTF 177

  Fly   210 EEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAI 274
            |:|:|.:...||:||.|.........|| ...|..:|.|.:||:||.:.::|:::..||.|..||
 Worm   178 EQVFNSTKADNTSVYVGNISQQTTDADL-RDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAI 241

  Fly   275 EHTHNSEVHGNLVKCFWGKENGGDNSANN 303
            ...:..|:.||.|:|.||:.....|.|.|
 Worm   242 MEMNGKEMAGNQVRCSWGRTQAVPNQALN 270

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_732944.2	RRM1_TIA1_like	9..80	CDD:409788	85/224 (38%)
		RRM2_TIA1_like	96..170	CDD:409789	41/73 (56%)
		RRM_SF	221..292	CDD:473069	24/70 (34%)
rnp-9	NP_001359585.1	RRM2_TIA1_like	88..162	CDD:409789	41/73 (56%)
		RRM_SF	189..259	CDD:473069	24/70 (34%)