Protein Alignment Rox8 and rnp-9

DIOPT Version :9

• Sequence 1: NP_001262897.1
• Gene: Rox8 / 42848
• FlyBaseID: FBgn0005649
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_001359585.1
• Gene: rnp-9 / 182350
• WormBaseID: WBGene00007396
• Length: 312
• Species: Caenorhabditis elegans
• Alignment Length: 224
• Identity: 85/224 - (37%)
• Similarity: 120/224 - (53%)
• Gaps: 25/224 - (11%)

  Fly    80 ATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFV 144
            |:.|..:.:.|.|.|.|:||||||.::..|.|:..|..|||:|..:::||..|.|||||.||||.
 Worm    72 ASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFP 136

  Fly   145 KKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTF 209
            .|..|||||..|||:|||.|::||||:.||                        :..:...:.||
 Worm   137 NKQNAENAIAGMNGKWIGKRAVRTNWAARK------------------------NSEENRDKLTF 177

  Fly   210 EEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAI 274
            |:|:|.:...||:||.|.........|| ...|..:|.|.:||:||.:.::|:::..||.|..||
 Worm   178 EQVFNSTKADNTSVYVGNISQQTTDADL-RDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAI 241

  Fly   275 EHTHNSEVHGNLVKCFWGKENGGDNSANN 303
            ...:..|:.||.|:|.||:.....|.|.|
 Worm   242 MEMNGKEMAGNQVRCSWGRTQAVPNQALN 270

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_001262897.1	ELAV_HUD_SF	5..274	CDD:273741	73/193 (38%)
		RRM1_TIA1_like	9..80	CDD:240798	85/224 (38%)
		RRM2_TIA1_like	96..170	CDD:240799	41/73 (56%)
		RRM3_TIA1_like	221..294	CDD:240800	26/72 (36%)
rnp-9	NP_001359585.1	RRM2_TIA1_like	88..162	CDD:240799	41/73 (56%)
		RRM3_TIA1_like	189..260	CDD:240800	25/71 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	59	1.000	Domainoid score	I7055
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1066369at2759
OrthoFinder	1	1.000	-	-		FOG0000924
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	7	6.780