| Sequence 1: | NP_001262897.1 | Gene: | Rox8 / 42848 | FlyBaseID: | FBgn0005649 | Length: | 470 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_495121.1 | Gene: | tiar-1 / 173967 | WormBaseID: | WBGene00015943 | Length: | 408 | Species: | Caenorhabditis elegans |
| Alignment Length: | 411 | Identity: | 163/411 - (39%) |
|---|---|---|---|
| Similarity: | 230/411 - (55%) | Gaps: | 59/411 - (14%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 5 QPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNKRL 69
Fly 70 FLEKEIKVNWATSPG-NQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTM 133
Fly 134 KSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNG 198
Fly 199 SGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIK 263
Fly 264 FVTKEAAAHAIEHTHNSEVHGNLVKCFWGKE-NGGDNSANNLNAAAAAAAASANVAAVAAANAAV 327
Fly 328 AAGAGMPGQMMTQQQIAAATGAAIPGQMMTPQQIAAQYPYAYQQMGYWYPPATYPTTQMQTQYMQ 392
Fly 393 Q--GYYPYAYPTSAQQAGGVP 411 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rox8 | NP_001262897.1 | ELAV_HUD_SF | 5..274 | CDD:273741 | 126/269 (47%) |
| RRM1_TIA1_like | 9..80 | CDD:240798 | 38/70 (54%) | ||
| RRM2_TIA1_like | 96..170 | CDD:240799 | 44/73 (60%) | ||
| RRM3_TIA1_like | 221..294 | CDD:240800 | 31/72 (43%) | ||
| tiar-1 | NP_495121.1 | PABP-1234 | 47..>302 | CDD:130689 | 129/276 (47%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 106 | 1.000 | Domainoid score | I4102 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 284 | 1.000 | Inparanoid score | I1730 |
| Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S1737 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1066369at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000924 | |
| OrthoInspector | 1 | 1.000 | - | - | otm14338 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_103013 | |
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1842 |
| SonicParanoid | 1 | 1.000 | - | - | X831 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 11 | 10.850 | |||||