DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rox8 and LOC1271032

DIOPT Version :10

Sequence 1:NP_732944.2 Gene:Rox8 / 42848 FlyBaseID:FBgn0005649 Length:470 Species:Drosophila melanogaster
Sequence 2:XP_309774.2 Gene:LOC1271032 / 1271032 VectorBaseID:AGAMI1_014965 Length:393 Species:Anopheles gambiae


Alignment Length:446 Identity:91/446 - (20%)
Similarity:154/446 - (34%) Gaps:142/446 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKII--REPGNDP-YAFIEYSNYQAATTAL 62
            ||:|. ::::|||:....:|:.|..:|..:|||.|.|::  ||.|... |.|.||.:.:.|.:|:
Mosquito     9 MDKSM-RSVFVGNIPYEATEEKLKDIFCEVGPVLSLKLVFDRESGKPKGYGFCEYKDQETALSAM 72

  Fly    63 TAMNKRLFLEKEIKVNWATS-------------------------PGNQP----KTDISSHHHIF 98
            ..:|...|..:.::|:.|.:                         |...|    ||         
Mosquito    73 RNLNGYEFGGRALRVDNACTEKSRMEMAALLQGPQVENPYGAECDPEETPDLIAKT--------- 128

  Fly    99 VGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSK-------GYAFVS---FVKKAEAENAI 153
            |..|.|:...|.:|:|.|       | |..||...::.       .||.:.   .::..::..|:
Mosquito   129 VTGLQPDQMYELMRQAKA-------C-IQNDPLEARNMLLENPQLTYALLQSAVVMRIVDSHTAL 185

  Fly   154 QAMNGQWIGSRS----IRTNWSTRKLPPPRE---PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEE 211
            ..::|     |:    :.|:.....:|..||   |:..|..|||......:..   ..:||...:
Mosquito   186 SFLHG-----RNTMPPVLTDDPLSAVPTVREQIHPAFDGPDGGGHEPRQFHHD---SDERHLLRD 242

  Fly   212 VYNQSS-----PTNTTV------YCGGFPPNVISDDLMHKHFVQFGPI--------QDVRVFKDK 257
            ...|::     |.:..:      ..|..|.|::.:.      |.|.|.        .|.|:.||.
Mosquito   243 RMAQAAAAPPVPMDMDLRMMDPFMAGHQPGNILPEP------VAFPPAGVEIRPRPVDPRLHKDP 301

  Fly   258 GFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGDNSANNLNAAAAAAAASANVAAVAA 322
            ..        |||.                      ...|....:....|.|::|.:.:.|..||
Mosquito   302 RL--------EAAG----------------------APSGPMGGSKAQMATASSALADHAAKAAA 336

  Fly   323 ANAAVAAGAG------------MPGQMMTQQQIAAATGAAIPGQMMTPQQIAAQYP 366
            |.....|||.            |....::.:|||..........::..:||:...|
Mosquito   337 AEPKSKAGASNDASDQEKAALIMQVLQLSDEQIALLPQDQRASILVLKEQISRNAP 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rox8NP_732944.2 RRM1_TIA1_like 9..80 CDD:409788 23/73 (32%)
RRM2_TIA1_like 96..170 CDD:409789 17/87 (20%)
RRM_SF 221..292 CDD:473069 13/84 (15%)
LOC1271032XP_309774.2 None

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