DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rox8 and eIF3g1

DIOPT Version :10

Sequence 1:NP_732944.2 Gene:Rox8 / 42848 FlyBaseID:FBgn0005649 Length:470 Species:Drosophila melanogaster
Sequence 2:XP_308202.3 Gene:eIF3g1 / 1269559 VectorBaseID:AGAMI1_005021 Length:271 Species:Anopheles gambiae


Alignment Length:186 Identity:46/186 - (24%)
Similarity:71/186 - (38%) Gaps:33/186 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VSEDLLI--------------ALFSTMGPVK--SCKIIREPGNDPYAFIEYSNYQAATTA----L 62
            ||||:.:              ||.|....||  :|:......:.||....|......|||    .
Mosquito    91 VSEDVFMQFITNKEEEQKNENALDSMKNIVKCRTCEGEHWSFHCPYKNSAYDKPTKPTTAPVPET 155

  Fly    63 TAMNKRLFLEKEIKVNWATSPGN-------QPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
            |:.:|.   .|.:..:...|.|.       :.:.|.|:   |.:.:||..:....|.|....||.
Mosquito   156 TSSSKP---GKYVPPHMKESQGKPGIGGAMRGRDDTSA---IRISNLSEAMTEADLEELVKKFGP 214

  Fly   121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLP 176
            .:...:.||..|...||:|:|.|..:.:|..||:.:||.......:...||..:.|
Mosquito   215 HTKMFLSRDKSTGLCKGFAYVHFRSRRDAATAIEVLNGYGYDHLILSVEWSKPQNP 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rox8NP_732944.2 RRM1_TIA1_like 9..80 CDD:409788 19/81 (23%)
RRM2_TIA1_like 96..170 CDD:409789 20/73 (27%)
RRM_SF 221..292 CDD:473069
eIF3g1XP_308202.3 eIF3g 25..138 CDD:463545 12/46 (26%)
RRM_eIF3G_like 191..265 CDD:409842 20/73 (27%)
Blue background indicates that the domain is not in the aligned region.

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