DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rox8 and LOC100490872

DIOPT Version :9

Sequence 1:	NP_001262897.1	Gene:	Rox8 / 42848	FlyBaseID:	FBgn0005649	Length:	470	Species:	Drosophila melanogaster
Sequence 2:	XP_002932728.2	Gene:	LOC100490872 / 100490872	-ID:	-	Length:	449	Species:	Xenopus tropicalis

Alignment Length:	184	Identity:	55/184 - (29%)
Similarity:	91/184 - (49%)	Gaps:	22/184 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly     3 ESQPKT--LYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-----PYAFIEYSNYQAATT 60
            ||:.||  :||.|....:.||   ..|...|  .|.|||   .||     .:..:.::..:.|..
Frog    40 ESKTKTCPIYVKNFVKEIDED---DFFGKCG--ASTKII---NNDCGQQTEFGLLPFNKQKDAIR 96

  Fly    61 ALTAM-NKRLFL-EKEIKVNWATSPGNQPKTDISSHH---HIFVGDLSPEIETETLREAFAPFGE 120
            |:..| ...::| :.:||....|....:|:......:   :::|.:||.||:...|.:.|||||.
Frog    97 AVDKMKGMDIYLAQAKIKEKRQTEFSKKPEPLHKPRYNSVNLYVKNLSYEIDDYRLNKEFAPFGI 161

  Fly   121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRK 174
            |::.:::|:..  :|||:.||.|...|||..|:..|||:.:.|:.:...|:.||
Frog   162 ITSAKVMREGG--RSKGFGFVCFSTPAEARKALSGMNGKILASKPLYVAWAQRK 213

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_001262897.1	ELAV_HUD_SF	5..274	CDD:273741	53/182 (29%)
		RRM1_TIA1_like	9..80	CDD:240798	19/77 (25%)
		RRM2_TIA1_like	96..170	CDD:240799	27/73 (37%)
		RRM3_TIA1_like	221..294	CDD:240800
LOC100490872	XP_002932728.2	PABP-1234	<7..431	CDD:130689	55/184 (30%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910