DRSC/TRiP Functional Genomics Resources

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Protein Alignment spas and PEX1

DIOPT Version :10

Sequence 1:NP_651206.3 Gene:spas / 42846 FlyBaseID:FBgn0039141 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_012724.1 Gene:PEX1 / 853636 SGDID:S000001680 Length:1043 Species:Saccharomyces cerevisiae


Alignment Length:237 Identity:78/237 - (32%)
Similarity:126/237 - (53%) Gaps:18/237 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   480 VEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAK---GLLLFGPPGNGKTLLARAVATECS 541
            ::|.||.....||..|.|.:..|:....:|  :..|.:   |:||:|.||.||||||.|||.:|.
Yeast   694 IKWGDIGALANAKDVLLETLEWPTKYEPIF--VNCPLRLRSGILLYGYPGCGKTLLASAVAQQCG 756

  Fly   542 ATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEF 606
            ..|:::....:.:|::|..|:.:|.||..|:.::|.|:|.||.||:..:|.......:.|:..:.
Yeast   757 LNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKRGHDSTGVTDRVVNQL 821

  Fly   607 LVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLL----- 664
            |.:.||..|.   |.:.:||||:||..:|.|.||  |..|.|..::|.|..|..:|..::     
Yeast   822 LTQMDGAEGL---DGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQAIVNSKDK 883

  Fly   665 ---QKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPI 703
               ||:.:......|:.:|:.|.|:||:||..|..:|.|:.:
Yeast   884 DTGQKKFALEKNADLKLIAEKTAGFSGADLQGLCYNAYLKSV 925

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spasNP_651206.3 MIT_spastin 230..308 CDD:239142
RecA-like_spastin 484..648 CDD:410932 60/168 (36%)
AAA_lid_3 676..727 CDD:465537 11/28 (39%)
Vps4_C <722..754 CDD:462762
PEX1NP_012724.1 PEX-1N 108..183 CDD:462729
CDC48 <401..1023 CDD:273521 78/237 (33%)
RecA-like_PEX1_r2 705..862 CDD:410934 58/161 (36%)
Blue background indicates that the domain is not in the aligned region.

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