Protein Alignment spas and RPT1A

DIOPT Version :9

• Sequence 1: NP_651206.3
• Gene: spas / 42846
• FlyBaseID: FBgn0039141
• Length: 758
• Species: Drosophila melanogaster
• Sequence 2: NP_175778.1
• Gene: RPT1A / 841812
• AraportID: AT1G53750
• Length: 426
• Species: Arabidopsis thaliana
• Alignment Length: 508
• Identity: 123/508 - (24%)
• Similarity: 202/508 - (39%)
• Gaps: 136/508 - (26%)

  Fly   269 EDGIAVDCWSGRG-----------DVWDRAQRLHDKMQTNLSMARDRLHFLALREQDL------Q 316
            ||.||:....|.|           ::.|.|::::|              ...::|.|.      |
plant    20 EDDIALLKTYGLGPYSAPIKKVEKEIKDLAKKIND--------------LCGIKESDTGLAPPSQ 70

  Fly   317 MQRLSLKEKQKEEAQSKPQKTREPMLAGMTNEPMKLRVRSSGYGPKATTSAQPTASGRKLTIGSK 381
            ...:|.|:..:||                  :|:::        .:.|....|.....|..|..|
plant    71 WDLVSDKQMMQEE------------------QPLQV--------ARCTKIISPNTEDAKYVINVK 109

  Fly   382 RPVNLAVANKSQTLPRNLGSKTSVGAVQRQPAKTAATPPAVRRQFSSGRNTPPQRSRTPINNNGP 446
            :.....|....:..|.::.....||..:.:.......||.:
plant   110 QIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKI------------------------ 150

  Fly   447 SGSGASTPVVSVKGVEQKLVQLILDEIVEGGAKVEWTDIAGQDVAKQALQEMVILPSVRPELFTG 511
                  .|.|::..||:|             ..|.:.|:.|.....:.::|:|.||.:.||.|..
plant   151 ------DPSVTMMTVEEK-------------PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVK 196

  Fly   512 LRA-PAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQ 575
            |.. |.||:|.:||||.||||||||||....|.|:.:..:.|..||||:|.::||.||.:||..:
plant   197 LGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 261

  Fly   576 PSIIFIDEVDSL----LSERSSSEHEASRRLKTEFLVEFDGLP--GNPDGDRIVVLAATNRPQEL 634
            ..|:|.||||::    ..:....::|..|.: .|.:.:.||..  ||     |.||.|||||..|
plant   262 ACIVFFDEVDAIGGARFDDGVGGDNEVQRTM-LEIVNQLDGFDARGN-----IKVLMATNRPDTL 320

  Fly   635 DEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKD 697
            |.|.||  |..::|...|||.::|..:.....:......|.. ...||::....:|:|:.::..:
plant   321 DPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIR-FELLARLCPNSTGADIRSVCTE 384

  Fly   698 AALEPIRELNVEQVKCLDISAMRAITEQDFHSSLKRIRRSVAPQSLNSYEKWS 750
            |.:..||            :..:.:||:||..::.::        :..|:|:|
plant   385 AGMYAIR------------ARRKTVTEKDFLDAVNKV--------IKGYQKFS 417

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spas	NP_651206.3	MIT_spastin	230..308	CDD:239142	9/49 (18%)
		P-loop_NTPase	482..>538	CDD:304359	27/56 (48%)
		AAA	515..652	CDD:214640	61/144 (42%)
		AAA	519..650	CDD:278434	57/138 (41%)
		Vps4_C	<722..754	CDD:286426	7/29 (24%)
RPT1A	NP_175778.1	RPT1	26..423	CDD:224143	119/502 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910