Protein Alignment spas and AT4G28000

DIOPT Version :10

• Sequence 1: NP_651206.3
• Gene: spas / 42846
• FlyBaseID: FBgn0039141
• Length: 758
• Species: Drosophila melanogaster
• Sequence 2: NP_001328776.1
• Gene: AT4G28000 / 828913
• AraportID: AT4G28000
• Length: 832
• Species: Arabidopsis thaliana
• Alignment Length: 875
• Identity: 231/875 - (26%)
• Similarity: 374/875 - (42%)
• Gaps: 197/875 - (22%)

  Fly    19 KSPIKSSSGAG-SSGGGLGGRQSTHRSSSASNVAAVVAGGSSAAGG--GSSSNRRSPGSSPDGDD 80
            ||.:.|:.|.| ..|.||...||..:.::         |..||..|  |....:.......||.:
plant     4 KSVLFSALGVGVGLGIGLASGQSLGKWAN---------GSISAEDGLTGEKIEQELVRQIVDGRE 59

  Fly    81 DTTTTDDLTPTTCSPRSGHHHSYGGY------SSSVHKQNL------YVVSFPIIFLFNVLRSLI 133
            .:.|.|:. |...|.::....:...|      ..|.|.:||      .::|.|..|...:|...:
plant    60 SSVTFDEF-PYYLSEKTRLLLTSAAYVHLKQSDISKHTRNLAPGSKAILLSGPAEFYQQMLAKAL 123

  Fly   134 YQLF-------------CIFRYLYGASTKVIYRP-HRRDCNIEIVVQNSSK--------EQQQSL 176
            ...|             ...:..||...|   .| |:|..: |:.:...|.        .|:::.
plant   124 AHYFESKLLLLDITDFSIKIQSKYGCVKK---EPSHKRSIS-ELTMDKMSNLMGSISVLSQKEAT 184

  Fly   177 NHPSELNREGDGQEQ-----QLSNQPQRFRPIQPLEMAANRPGGGYSPGPGDPLLAKQKHHHRRA 236
            .  ..|.|...|.:.     .:::||.|.:    ...:|.......|......:.|..|......
plant   185 R--GTLRRHTSGNDLHSRGFDVTSQPPRLK----RNASAASDMSSISSRSATSVSASSKRSANLC 243

  Fly   237 FE---YISKALK----IDEENEGHKELAIELYRKGIKELEDGIAVDCWSGRGDVWDRAQRLHDKM 294
            |:   ::....|    |.|.|      .|.:|.:.:::|       |.|.|  .:...|||..|:
plant   244 FDERLFLQSLYKVLVSISETN------PIIIYLRDVEKL-------CQSER--FYKLFQRLLTKL 293

  Fly   295 QTNLSMARDRL-------------------HFLALREQDLQMQRLSLKEKQKEEA-----QSKPQ 335
            ...:.:...||                   :.:.:|..:.:.|.:|.|.:.:::.     |....
plant   294 SGPVLVLGSRLLEPEDDCQEVGEGISALFPYNIEIRPPEDENQLMSWKTRFEDDMKVIQFQDNKN 358

  Fly   336 KTREPMLAG-----------------MTNEPMKLRVRSSGYGPKATTSAQPTASGRKLTIGS--- 380
            ...|.:.|.                 :::...::.|.:..|  ....:.:|.....:|.|.|
plant   359 HIAEVLAANDLECDDLGSICHADTMFLSSHIEEIVVSAISY--HLMNNKEPEYKNGRLVISSNSL 421

  Fly   381 KRPVNLAVANK-----SQTLPRNLGSKTSVG-AVQRQPAKTAATPPAVRRQ----FSSGRNTPPQ 435
            ...:|:....:     |..|..|:.||...| .:.:..:|:..|.|..:.:    ..:.:|..|.
plant   422 SHGLNILQEGQGCFEDSLKLDTNIDSKVEEGEGITKSESKSETTVPENKNESDTSIPAAKNECPL 486

  Fly   436 RSRTPINNNGPSGSGASTPVVSVKGVEQKLVQLILDEIVEGG-AKVEWTDIAGQDVAKQALQEMV 499
            ..:.|::...|               :.:..:.|..|::... ..|.:.||...|..|::|||:|
plant   487 PPKAPVHEVAP---------------DNEFEKRIRPEVIPANEIGVTFADIGSLDETKESLQELV 536

  Fly   500 ILPSVRPELFT-GLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKL 563
            :||..||:||. ||..|.:|:|||||||.|||::|:|:|.|..|:|:|:|.:::|||:.|:.||.
plant   537 MLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMMAKAIANEAGASFINVSMSTITSKWFGEDEKN 601

  Fly   564 VRALFAVARHMQPSIIFIDEVDSLLSERSS-SEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAA 627
            |||||.:|..:.|:|||:|||||:|.:|:. .||||.|::|.||:..:|||..|. ||||:||||
plant   602 VRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMSNA-GDRILVLAA 665

  Fly   628 TNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEAL--RRLAKITDGYSGSD 690
            ||||.:||||.:|||.:|:.|.||..::||.:|..||.|:    .||.|  :.||::||||||||
plant   666 TNRPFDLDEAIIRRFERRIMVGLPSVESREKILRTLLSKE----KTENLDFQELAQMTDGYSGSD 726

  Fly   691 LTALAKDAALEPIRELNVEQVKCL-----------------------DISAMRAIT-----EQDF 727
            |......||..|:||| ::| :||                       ::|..|.||     .:|.
plant   727 LKNFCTTAAYRPVREL-IKQ-ECLKDQERRKREEAEKNSEEGSEAKEEVSEERGITLRPLSMEDM 789

  Fly   728 HSSLKRIRRSVAPQ--SLNSYEKWSQDYGD 755
            ..:..::..|.|.:  .:|..::|:..||:
plant   790 KVAKSQVAASFAAEGAGMNELKQWNDLYGE 819

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spas	NP_651206.3	MIT_spastin	230..308	CDD:239142	18/103 (17%)
		RecA-like_spastin	484..648	CDD:410932	91/165 (55%)
		AAA_lid_3	676..727	CDD:465537	25/80 (31%)
		Vps4_C	<722..754	CDD:462762	7/38 (18%)
AT4G28000	NP_001328776.1	RPT1	487..762	CDD:440835	128/296 (43%)