Protein Alignment spas and AT3G27120

DIOPT Version :10

• Sequence 1: NP_651206.3
• Gene: spas / 42846
• FlyBaseID: FBgn0039141
• Length: 758
• Species: Drosophila melanogaster
• Sequence 2: NP_001319654.1
• Gene: AT3G27120 / 822331
• AraportID: AT3G27120
• Length: 680
• Species: Arabidopsis thaliana
• Alignment Length: 607
• Identity: 198/607 - (32%)
• Similarity: 302/607 - (49%)
• Gaps: 127/607 - (20%)

  Fly   207 EMAANRPGGGY-SPGPGDPLLAKQKHHHRRAFEYISKALKIDEENEGHKELAIELYRKGIKELED 270
            |:|...||..: |.|..|....||..:.         ...:.:.|           .||:||:|:
plant   146 ELANTAPGAIFGSKGGFDVEKIKQSKYF---------GFHVSQSN-----------GKGVKEMEE 190

  Fly   271 GIAVDCWSGRGDVWDRAQRLHDKMQTNLSMAR-DRLHFLALREQDLQMQRLSLKEKQKEEAQSKP 334
                     |.|    ..:|..|...::..|: ..|:..::.:.|.|         :|....::.
plant   191 ---------RHD----TDKLIPKAPKSMMQAKLTSLYGNSIGKPDNQ---------RKTSVNNQD 233

  Fly   335 QKTREPMLAGMTNEPMKLRVRSSGYG-----PKATTSAQPTASGRK----------------LTI 378
            :.:.|.::.          .||.|:|     |.|.||:.......|                :.:
plant   234 RASDECVIV----------ERSHGFGFGTKRPHAETSSLANDGEVKEDGAPNGFVSAKIKLEMDV 288

  Fly   379 GSKR-----PVN-LAVANKSQTLPRNLGSKTSVGAVQR-------QPAKTAATPPAVRRQFSSGR 430
            ..||     |.: |:..:....|.|..||::  |.::|       .|.||            :|.
plant   289 RQKRGSTESPSSCLSPQSDKNALGRGYGSRS--GGLRRGYRSNFVPPVKT------------NGN 339

  Fly   431 NTPPQRSRTPINNN---------------GPSGSGASTPVVSVKGVEQKLVQLILDEIVEGGAKV 480
            |.....||.....:               ||.|....    .::.:|.:|::.:.:||::....|
plant   340 NVGNLTSRIGGKTDDALDDSTRTCLEMLCGPDGELPE----KLRNLEPRLIEHVSNEIMDRDPNV 400

  Fly   481 EWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFL 545
            .|.||||.:.||:.:.||||.|.:||::|.|.|:|.||||||||||.|||::.:|:|.|..|||.
plant   401 RWDDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGKGLLLFGPPGTGKTMIGKAIAGEAKATFF 465

  Fly   546 NISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSER-SSSEHEASRRLKTEFLVE 609
            .|||:|||||::|:|||||||||.||...||::||:||:|||||:| |..|||:||||||:||:|
plant   466 YISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSDGEHESSRRLKTQFLIE 530

  Fly   610 FDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQG-SPLDT 673
            .:|.  :...::|:::.||||||||||||.||.|||:|:.||..:.|..::..||:|.| ..|..
plant   531 MEGF--DSGSEQILLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIIQNLLKKDGLFTLSD 593

  Fly   674 EALRRLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISA--MRAITEQDFHSSLKRIRR 736
            :.:..:..:|:||||||:..|.|||.:.|:||.....:...:::.  ||.:|.|||..:|:.:|.
plant   594 DDMNIICNLTEGYSGSDMKNLVKDATMGPLREALKRGIDITNLTKDDMRLVTLQDFKDALQEVRP 658

  Fly   737 SVAPQSLNSYEKWSQDYGDITI 758
            ||:...|..||.|:..:|.:::
plant   659 SVSQNELGIYENWNNQFGSLSL 680

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spas	NP_651206.3	MIT_spastin	230..308	CDD:239142	12/78 (15%)
		RecA-like_spastin	484..648	CDD:410932	100/164 (61%)
		AAA_lid_3	676..727	CDD:465537	18/52 (35%)
		Vps4_C	<722..754	CDD:462762	12/31 (39%)
AT3G27120	NP_001319654.1	P-loop containing Nucleoside Triphosphate Hydrolases	382..567	CDD:476819	106/186 (57%)
		AAA_lid_3	593..>628	CDD:465537	14/34 (41%)
		Vps4_C	<644..676	CDD:462762	12/31 (39%)