DRSC/TRiP Functional Genomics Resources

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Protein Alignment spas and AT2G45500

DIOPT Version :9

Sequence 1:NP_651206.3 Gene:spas / 42846 FlyBaseID:FBgn0039141 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001323445.1 Gene:AT2G45500 / 819158 AraportID:AT2G45500 Length:497 Species:Arabidopsis thaliana


Alignment Length:528 Identity:200/528 - (37%)
Similarity:286/528 - (54%) Gaps:99/528 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 EYISKALKIDEENEGHKELAIELYRKGIKELEDGIAVDCWSGRGDV---WDRAQRLHDKMQTNLS 299
            |.|:..||      |:.:||.|...||::..|       |....|.   :..|||:.::..:..|
plant    56 ERIAYKLK------GYFDLAKEEIAKGVRAEE-------WGLHDDALLHYRNAQRIMNEATSTPS 107

  Fly   300 MARDRLHFLALREQDLQMQRLSLKEKQKEEA--------QSKPQKTREPMLAGMTNEPMKLRVRS 356
            .:                 .:|..||:|..:        |::..:..:.:..||:...     |:
plant   108 PS-----------------YISSSEKEKVRSYREKISNWQNQVSERLQALGVGMSENK-----RT 150

  Fly   357 SGYGPKATTSAQPTASGRKLTIGSKRPVNLAVANKSQTLPRNLGSKTSVGAVQRQPAKTAATPPA 421
            ..|...|:.|:  |||..:.|:..|.|    ||......|||             |...||:|  
plant   151 VAYPSSASVSS--TASRYRKTLSQKTP----VARGGVATPRN-------------PKDAAASP-- 194

  Fly   422 VRRQFSSGRNTPPQRSRTPINNNGPSGSGASTPVVSVKGVEQKLVQLILDEIVEGGAKVEWTDIA 486
                             .|:..:|             ...:.|||::|...||:....|:|.|:|
plant   195 -----------------KPVKESG-------------NVYDDKLVEMINTTIVDRSPSVKWDDVA 229

  Fly   487 GQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAAS 551
            |.:.|||||.||||||:.|.:||||||.||:|||||||||||||:||:|||:|..|||.|:||:|
plant   230 GLNGAKQALLEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASS 294

  Fly   552 LTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGN 616
            ||||:||:.||||:.||.||...|||:||:||:||::|.||:||:|||||||:|||::|||:..|
plant   295 LTSKWVGEAEKLVKTLFQVAISRQPSVIFMDEIDSIMSTRSTSENEASRRLKSEFLIQFDGVTSN 359

  Fly   617 PDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAK 681
            || |.::::.|||:|||||:|.|||..||:||.|||...|:||....|:.|...|....:.::.|
plant   360 PD-DLVIIIGATNKPQELDDAVLRRLVKRIYVPLPDSNVRKLLFKTKLKCQPHSLSDGDIDKIVK 423

  Fly   682 ITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRAITEQDFHSSLKRIRRSVAPQSLNSY 746
            .|:|||||||.||.::||:.|||||.. .:..:..:.:|::...||..|:..||.|::.......
plant   424 ETEGYSGSDLQALCEEAAMMPIRELGA-NILTIQANKVRSLRYDDFRKSMAVIRPSLSKSKWEEL 487

  Fly   747 EKWSQDYG 754
            |:|:.::|
plant   488 ERWNSEFG 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spasNP_651206.3 MIT_spastin 230..308 CDD:239142 17/72 (24%)
P-loop_NTPase 482..>538 CDD:304359 41/55 (75%)
AAA 515..652 CDD:214640 90/136 (66%)
AAA 519..650 CDD:278434 86/130 (66%)
Vps4_C <722..754 CDD:286426 8/31 (26%)
AT2G45500NP_001323445.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 181 1.000 Domainoid score I1040
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8970
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1176820at2759
OrthoFinder 1 1.000 - - FOG0001088
OrthoInspector 1 1.000 - - otm40245
orthoMCL 1 0.900 - - OOG6_100722
Panther 1 1.100 - - LDO PTHR23074
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3342
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.780

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