Sequence 1: | NP_651206.3 | Gene: | spas / 42846 | FlyBaseID: | FBgn0039141 | Length: | 758 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001102690.1 | Gene: | Pex1 / 500006 | RGDID: | 1559939 | Length: | 1283 | Species: | Rattus norvegicus |
Alignment Length: | 228 | Identity: | 86/228 - (37%) |
---|---|---|---|
Similarity: | 125/228 - (54%) | Gaps: | 11/228 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 482 WTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAK---GLLLFGPPGNGKTLLARAVATECSAT 543
Fly 544 FLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLV 608
Fly 609 EFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPL 671
Fly 672 DTEALRRLAKITDGYSGSDLTALAKDAALEPIR 704 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
spas | NP_651206.3 | MIT_spastin | 230..308 | CDD:239142 | |
P-loop_NTPase | 482..>538 | CDD:304359 | 27/58 (47%) | ||
AAA | 515..652 | CDD:214640 | 56/141 (40%) | ||
AAA | 519..650 | CDD:278434 | 54/132 (41%) | ||
Vps4_C | <722..754 | CDD:286426 | |||
Pex1 | NP_001102690.1 | PEX-2N | 19..98 | CDD:286362 | |
PEX-1N | 104..179 | CDD:286361 | |||
AAA | 591..741 | CDD:214640 | |||
AAA | 595..724 | CDD:278434 | |||
AAA | 877..1009 | CDD:214640 | 54/134 (40%) | ||
AAA | 877..1006 | CDD:278434 | 54/131 (41%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0464 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.900 |