DRSC/TRiP Functional Genomics Resources

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Protein Alignment spas and Iqca1l

DIOPT Version :10

Sequence 1:NP_651206.3 Gene:spas / 42846 FlyBaseID:FBgn0039141 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001019488.2 Gene:Iqca1l / 499971 RGDID:1564789 Length:822 Species:Rattus norvegicus


Alignment Length:606 Identity:138/606 - (22%)
Similarity:247/606 - (40%) Gaps:113/606 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 IVVQNSSKEQQQSL--NHPSELNREGDGQEQQLSNQPQRFRPIQPLEMAANRPGGGYSPGPGDPL 225
            |:||.:.:.:|..|  ....|:.:|.:...:...|..|:|...|. .:...:...||       |
  Rat   165 IIVQCAERARQGRLRATFMREIRKEEERDRRIRENGRQKFSQDQG-AIVIQKVWKGY-------L 221

  Fly   226 LAKQKHHHRR-AFEYIS------------------------KALKIDEENEGHKELA------IE 259
            ..|:....|| ..|:|.                        :..::::|.|..:.:|      .|
  Rat   222 QRKRIEQDRRMEMEFIGMLPSSSQTTRQNALAQAFVGEESRRTRQVEKEEEFQEAIAKTHESLTE 286

  Fly   260 LYRKGIKE-LEDGIA---VDCWSGRG---DVWDRAQRLHDKMQTNLSMARDRLHFLALREQDLQM 317
            .....:|| ::|.|.   ::|.:..|   |..|.|......:..:.:..:.|....|..:::.:.
  Rat   287 TEGPDMKERMKDQIRQWFIECHALTGRFPDYPDEASGGSYLIFADKTPEQVRQELEAQAQENKKK 351

  Fly   318 QRLSLKEKQKEEAQSKPQKTREPMLAGMTNEPMKLRVRSSGYGPKATTSAQPTASGRKLTIGSKR 382
            ::...|:|.||:.:.|.:||:|.  ....:..:..:|..|...|......:...|..|....:|.
  Rat   352 EQEKNKDKVKEKKEKKKKKTKEE--KAKKDPEVMFKVLPSKSIPVINAGHEEFTSIWKSRYDNKH 414

  Fly   383 PVNLAVANKSQTLPR------NLGSKTSVGAVQRQPAKTAATPPAVRRQFSSGRNTPPQRSRTPI 441
            |   :.:..|:||..      .:..:..|..:.||..:....  ||.|:.:....:|.::     
  Rat   415 P---SQSFDSETLREEKRKQVEMEIRVQVDELMRQELRNLRL--AVDREETRPLKSPKKK----- 469

  Fly   442 NNNGPSGSGAS------TPVVSVKGVEQKLVQLILDEIVEGGAKVEWTDIAGQDV---AKQALQE 497
               |...||..      ||..||..:.::||.:   .:::....|...|..|..:   :...|..
  Rat   470 ---GGKKSGKKKKEKDLTPDRSVDSLFEELVVI---GLIKKSLLVTLNDYIGDCLYLGSTLTLAN 528

  Fly   498 MVILPS---VRPE--LFTGLR---------AP-AKGLLLFGPPGNGKTLLARAVATECSATFLNI 547
            .:.:||   :|..  |:..||         || .:.:||.||.|.||.:|.:||.||..|...::
  Rat   529 KIPMPSLFDIRQNIALYGVLRLGSHDIHTMAPLVRSILLVGPSGMGKKMLVQAVCTETGANLFDL 593

  Fly   548 SAASLTSKYVG--DGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEA--SRRLKTEFLV 608
            |..::..||.|  ..:.|:..:|.|||..|||:|:|...:....::...|...  .:|:|.:.:.
  Rat   594 SPGNVMGKYPGKNGSQLLMHIVFKVARVFQPSVIWIGNTEKTFYKKIPKEERRMDPKRIKKDLMR 658

  Fly   609 EFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRV-YVSLPDEQTRELLLNRLLQKQG---- 668
            ....|  .| |||::::..|.|||..:...|.||.:|: ::..||..:|.:|..|:::.||    
  Rat   659 ATRQL--GP-GDRVMLIGTTERPQLAEMKGLCRFYERILFIPRPDYASRYVLWKRMIENQGIGVQ 720

  Fly   669 --SPLDTEALRRLAKITDGYS 687
              ..||..|   ||:::|||:
  Rat   721 QTQSLDISA---LARVSDGYT 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spasNP_651206.3 MIT_spastin 230..308 CDD:239142 18/115 (16%)
RecA-like_spastin 484..648 CDD:410932 54/186 (29%)
AAA_lid_3 676..727 CDD:465537 5/12 (42%)
Vps4_C <722..754 CDD:462762
Iqca1lNP_001019488.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 338..378 10/41 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 457..484 5/34 (15%)
P-loop containing Nucleoside Triphosphate Hydrolases 537..696 CDD:476819 49/161 (30%)
Blue background indicates that the domain is not in the aligned region.

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