Protein Alignment spas and Rpt3R

DIOPT Version :9

• Sequence 1: NP_651206.3
• Gene: spas / 42846
• FlyBaseID: FBgn0039141
• Length: 758
• Species: Drosophila melanogaster
• Sequence 2: NP_649938.2
• Gene: Rpt3R / 41190
• FlyBaseID: FBgn0037742
• Length: 405
• Species: Drosophila melanogaster
• Alignment Length: 473
• Identity: 120/473 - (25%)
• Similarity: 206/473 - (43%)
• Gaps: 114/473 - (24%)

  Fly   290 LHDKMQTNLSMARDRLHFLALREQDLQMQRLSLKEKQKE------EAQSKPQKTRE-PMLAGMTN 347
            |:.|:|..|.:              :|:|...:||:|:.      .||.:.::.:. |::.|...
  Fly    30 LYKKLQMELEL--------------IQVQEDYIKEEQRNLKKEFIHAQEEVKRIKAVPLVIGQFL 80

  Fly   348 EPMKLRVRSSGYGPKATTSAQPTASGRKLTIGSKRPVN-LAVANKSQTLPRNLGSKTSVGAVQRQ 411
            |.:     ....|..|:|:            ||...|. |:..::.|..|     .:|||..::.
  Fly    81 EAV-----DENNGIVASTT------------GSNYYVRVLSTIDREQLKP-----SSSVGLHKQS 123

  Fly   412 PAKTAATPPAVRRQFSSGRNTPPQRSRTPINNNGPSGSGASTPVVSVKGVEQKLVQLILDEIVEG 476
            .......||                              .:...:|:...::|
  Fly   124 NCLVDLVPP------------------------------EADSTISMLSPDEK------------ 146

  Fly   477 GAKVEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRA-PAKGLLLFGPPGNGKTLLARAVATEC 540
             ..:.::||.|.|:.||.::|.|.||....:|:..:.. |.:|:|||||||.|||:||:|||...
  Fly   147 -PDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHT 210

  Fly   541 SATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASR---RL 602
            :|:|:.:..:....||:|:|.::||.||.:|:...||||||||:|::.::|..::..|.|   |:
  Fly   211 TASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGADREVQRI 275

  Fly   603 KTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQ 665
            ..|.|.:.||.   .:...|.|:.||||...||.|.||  |..:::.:.|||.:.:.|:...:..
  Fly   276 LLELLNQMDGF---DETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLPDRRQKRLVFTTITS 337

  Fly   666 KQ--GSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRAITEQDFH 728
            |.  |..:|.|.:  :|: .|..|.:|:.|:.::|.:..:||...            .:..:||.
  Fly   338 KMNVGEDVDLEDI--IAR-PDKISNADINAICQEAGMHAVRENRY------------VVNAKDFE 387

  Fly   729 SSLK-RIRRSVAPQSLNS 745
            ...| .:|:..|.....|
  Fly   388 KGYKTSVRKDEAQHEFYS 405

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spas	NP_651206.3	MIT_spastin	230..308	CDD:239142	4/17 (24%)
		P-loop_NTPase	482..>538	CDD:304359	27/56 (48%)
		AAA	515..652	CDD:214640	58/141 (41%)
		AAA	519..650	CDD:278434	55/135 (41%)
		Vps4_C	<722..754	CDD:286426	6/25 (24%)
Rpt3R	NP_649938.2	PTZ00454	20..405	CDD:240423	119/471 (25%)
		AAA	189..322	CDD:278434	55/135 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910