DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spas and CG14183

DIOPT Version :10

Sequence 1:NP_651206.3 Gene:spas / 42846 FlyBaseID:FBgn0039141 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_649172.3 Gene:CG14183 / 40192 FlyBaseID:FBgn0036931 Length:872 Species:Drosophila melanogaster


Alignment Length:499 Identity:106/499 - (21%)
Similarity:183/499 - (36%) Gaps:103/499 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 LKEKQKEEAQSKPQKTREPMLAGMTNEPMKLRVRSSGYGPKATTSAQPTASGRKLTIGSKRPVNL 386
            |::|:|:|.:.|.:|.::   ..|.....:.::|.:|.                :.||.:...:.
  Fly   403 LRDKEKKEKRKKKEKLKQ---LKMKEAKRRKKLRDAGV----------------IDIGYELTASK 448

  Fly   387 AVANKSQTLP------RNLGSKTSVGAVQRQPAKTAATPPAVRRQFSSGRNTPPQRSRTP----- 440
            |:.|..:|:.      ||:....:   ....|.|...|...:.:.....|....:..|..     
  Fly   449 AIENIEETMKKYSKDWRNVDEYLN---KNHDPIKEWVTEEQLAKIHQEVRGLVDEYMRVEYELLR 510

  Fly   441 ---INNNGPSGSGASTPVVSVKGVEQK----------LVQLILDEIVEGGAKVEWTDIAGQDVAK 492
               ..:|..............|..::|          .::.:.:|:.:.|. :|  :|..:|..:
  Fly   511 EALAKDNDEKYKALKVKYPKKKKEKRKKKPKDMTGDRTLESLYNELKDAGI-IE--EIGHRDFDE 572

  Fly   493 QALQEMVILPSVRPELFTGLRAPAKG-----------------------LLLFGPPGNGKTLLAR 534
            .......:....|.|.......||||                       |||.||..:||.||..
  Fly   573 FITDFNFVADDTRDEDGLTTLGPAKGDIKMVIQESMLGMGEFDVPKPKSLLLIGPLNSGKRLLCE 637

  Fly   535 AVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEH-EA 598
            .:|:|..|.|:|:|..: |.||..|.:..:..:..||:..||:|::|:|...|..::...|. |.
  Fly   638 IIASELDAVFMNLSPEN-TYKYAKDLKYFLHVILKVAKAFQPTIMYIEEAHRLFWKKVPPEAVEI 701

  Fly   599 SRRLKTEFLVE--FDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLN 661
            :.||....|..  ...|..|   |:||::..:|.|...:....|.|.|.:.:...|..|..||..
  Fly   702 NPRLLGTSLASKILKPLKKN---DKIVLVGTSNMPWAANGGIKRAFQKVLLIPKCDYGTSFLLWL 763

  Fly   662 RLLQKQGSPLDTE--ALRRLAKITDGYSGSDLTALAKDA------------ALEPIREL------ 706
            .|: .:.:|.|.:  |...||::...|:..|:....|:.            ||:|...|      
  Fly   764 ELM-TENAPDDMKEYAYSALARVLQAYNSGDIDDNVKETLNIDRKMRLKNEALDPNEFLEYFLSK 827

  Fly   707 NVEQVKCLDISAMRAITEQDFHSS--LKRIRRSVAPQSLNSYEK 748
            |...:...|...|....:. |.||  |:::|:|...|.|....|
  Fly   828 NEPPIFPPDEKIMDKFNKW-FGSSNKLEKLRKSYMAQKLAKASK 870

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spasNP_651206.3 MIT_spastin 230..308 CDD:239142
RecA-like_spastin 484..648 CDD:410932 50/189 (26%)
AAA_lid_3 676..727 CDD:465537 12/68 (18%)
Vps4_C <722..754 CDD:462762 9/29 (31%)
CG14183NP_649172.3 Adgb_C_mid-like <201..>278 CDD:412094
globin helix H 201..232 CDD:412094
IQCD 247..278 CDD:467745
IQ motif 259..277 CDD:412094
P-loop containing Nucleoside Triphosphate Hydrolases 617..750 CDD:476819 42/136 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.