Sequence 1: | NP_651206.3 | Gene: | spas / 42846 | FlyBaseID: | FBgn0039141 | Length: | 758 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285396.1 | Gene: | Vps4 / 32777 | FlyBaseID: | FBgn0283469 | Length: | 442 | Species: | Drosophila melanogaster |
Alignment Length: | 331 | Identity: | 138/331 - (41%) |
---|---|---|---|
Similarity: | 202/331 - (61%) | Gaps: | 40/331 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 462 EQKLVQLILDEIVEGGAKVEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPG 526
Fly 527 NGKTLLARAVATECS-ATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSE 590
Fly 591 RSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQT 655
Fly 656 RELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIREL-------------- 706
Fly 707 -NVEQ------VKC------------LDISAMR----AITEQDFHSSLKRIRRSVAPQSLNSYEK 748
Fly 749 WSQDYG 754 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
spas | NP_651206.3 | MIT_spastin | 230..308 | CDD:239142 | |
P-loop_NTPase | 482..>538 | CDD:304359 | 36/55 (65%) | ||
AAA | 515..652 | CDD:214640 | 78/137 (57%) | ||
AAA | 519..650 | CDD:278434 | 74/131 (56%) | ||
Vps4_C | <722..754 | CDD:286426 | 9/31 (29%) | ||
Vps4 | NP_001285396.1 | MIT_VPS4 | 6..69 | CDD:239141 | |
RecA-like_VPS4 | 126..296 | CDD:410929 | 98/171 (57%) | ||
AAA_lid_3 | 323..361 | CDD:407720 | 14/37 (38%) | ||
Vps4_C | 379..439 | CDD:401324 | 12/59 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45467080 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D59575at33392 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR23074 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.950 |