DRSC/TRiP Functional Genomics Resources

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Protein Alignment spas and Iqca1l

DIOPT Version :10

Sequence 1:NP_651206.3 Gene:spas / 42846 FlyBaseID:FBgn0039141 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_808344.3 Gene:Iqca1l / 231045 MGIID:3045319 Length:825 Species:Mus musculus


Alignment Length:684 Identity:159/684 - (23%)
Similarity:275/684 - (40%) Gaps:153/684 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 IVVQNSSKEQQQSL--NHPSELNREGDGQEQQLSNQPQRFRPIQPLEMAANRPGGGYSPGPGDPL 225
            |:||::.:.:|..|  ....|:.:|.:...:...|..|:|...|. .:...:...||       |
Mouse   165 ILVQSAERARQGRLRATFMREIRKEEERDRRIWENGQQKFSRDQG-AIVIQKVWKGY-------L 221

  Fly   226 LAKQKHHHRRA-FEYI-----------------------SKALKIDEENEGHKELAIELYRK--- 263
            ..|:....||. .|:|                       |:.::..|:.|..:|...:.|..   
Mouse   222 QRKRIEQDRRVEMEFIGMLPSPNQTARLNTLNQAFLGEESRRMRQVEKEEEFQEAIGKTYESLTE 286

  Fly   264 ----GIKE-LEDGIA---VDCWSGRG---DVWDRAQ---------------RLHDKMQTNLSMAR 302
                .:|| ::|.|.   ::|.:..|   |..|.|.               ||..:.|...|..:
Mouse   287 TEGPDMKERMKDQIRQWFIECHALTGRFPDYPDEASGGSYLIFADKTPEQVRLDLEAQAQESRKK 351

  Fly   303 DRLHFLALREQDLQMQRLSLKEKQKEEAQSKPQKTREPMLAGMTNEP-MKLRVRSSGYGPKATTS 366
            |            |.::...|||:||:.:.|.:|.:|..   :..|| :..||..|...|.....
Mouse   352 D------------QEKKEKNKEKEKEKKEKKKKKVKEEK---VKKEPEVMFRVLPSKSIPVINAG 401

  Fly   367 AQPTASGRKLTIGSKRPVNLAVANKSQTLPR------NLGSKTSVGAVQRQPAKTAATPPAVRRQ 425
            .:...|..|....:|.|   :....|:||..      .:..:..|..:.||..|....  ||.|:
Mouse   402 HEEYTSVWKSRYDNKHP---SQNFDSETLREEKRKQVEMEIRVQVDELMRQELKNLRL--AVDRE 461

  Fly   426 FSSGRNTPPQRSRTPINNNGPSGSGAS------TPVVSVKGVEQKLVQLILDEIVEGGAKVEWTD 484
            .:....:|.::        |...||..      ||   .:.|:....:|::..:::..|.|..:|
Mouse   462 ETRPLKSPKKK--------GGKKSGKKKKEKDLTP---DRSVDSLFEELVIIGLIKKSALVTLSD 515

  Fly   485 IAGQDV---AKQALQEMVILPSV-----RPELFTGLR---------AP-AKGLLLFGPPGNGKTL 531
            ..|..:   :...|...:.:||:     ...|:..||         || .:.:||.||.|.||.:
Mouse   516 YIGDCLYLGSTLTLANKMPMPSLFDIRQNMALYGVLRLGSHDIHTMAPLVRSILLVGPSGMGKKM 580

  Fly   532 LARAVATECSATFLNISAASLTSKYVG--DGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSS 594
            |.:||.||..|...::|..:|..||.|  ..:.||..:|.|||.:|||:|:|...:....::...
Mouse   581 LVQAVCTETGANLFDLSPDNLMGKYPGKNGAQLLVHIVFKVARLLQPSVIWIGNTEKTFYKKVPK 645

  Fly   595 EHEA--SRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRV-YVSLPDEQTR 656
            |...  .:|:|.:.:.....|  :| |||::::..|.|||..:...|.||.:|: ::..||..:|
Mouse   646 EERTMDPKRIKKDLMRATKQL--SP-GDRVMLIGTTERPQLAEMKGLCRFYERILFIPRPDYASR 707

  Fly   657 ELLLNRLLQKQG------SPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLD 715
            .:|..|:::.||      |.||..|   ||:::|||:.|.:        |:.|:.:..|: :.|.
Mouse   708 YVLWKRMIESQGRGVQLTSSLDVSA---LARVSDGYTPSHI--------LQSIQSVLTER-RLLQ 760

  Fly   716 ISAMRAITEQDFHSSLKRIRRSVAPQSLNSYEKW 749
            : ..:.:...:|...|.|: ..|..:...|.::|
Mouse   761 L-IKKPLVASEFVGHLARL-DPVYREEEESLKEW 792

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spasNP_651206.3 MIT_spastin 230..308 CDD:239142 23/130 (18%)
RecA-like_spastin 484..648 CDD:410932 55/186 (30%)
AAA_lid_3 676..727 CDD:465537 10/50 (20%)
Vps4_C <722..754 CDD:462762 6/28 (21%)
Iqca1lNP_808344.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..378 12/45 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 459..487 5/35 (14%)
P-loop containing Nucleoside Triphosphate Hydrolases 540..699 CDD:476819 50/161 (31%)

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