DRSC/TRiP Functional Genomics Resources

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Protein Alignment spas and AgaP_AGAP001612

DIOPT Version :9

Sequence 1:NP_651206.3 Gene:spas / 42846 FlyBaseID:FBgn0039141 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_321486.4 Gene:AgaP_AGAP001612 / 1281560 VectorBaseID:AGAP001612 Length:835 Species:Anopheles gambiae


Alignment Length:492 Identity:140/492 - (28%)
Similarity:216/492 - (43%) Gaps:102/492 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   317 MQRLSLKEKQKEEAQSKPQKTREPMLAGMTNEPMKLRVRSSGY-GPKATTSAQP---TASGRKLT 377
            |..:|.:.:.|........|..||::..:.|..: ..|.:.|: ..:.|.|.|.   |..||:. 
Mosquito   369 MTSISSQTETKLSTAFNKAKVCEPLIICLENFEV-FGVDNEGHEDQRITGSFQAELMTLFGRQY- 431

  Fly   378 IGSKRPVNLAVANKSQTLPRNLGSKTSVG-AVQRQPAKTAATPPAVRRQFSSGRNTPPQRSRTPI 441
              |...|.:||||:.::   |....||:. .|.:..|.|.|....:.|..|.|     .|.|.|:
Mosquito   432 --SHPVVVVAVANQKES---NTPKLTSLFLEVIQLHAPTTAERLELLRWISLG-----HRYRLPV 486

  Fly   442 NNNGPSGSGASTPVVSVKGVEQKLVQLILDEIVEGGA---------------------------- 478
                     |....::.:.....|..|   |::.|.|                            
Mosquito   487 ---------AQLQKIAEQSQGFTLADL---ELLYGNALEAWRRSQDTGRVGLNHFLALLDHMQST 539

  Fly   479 -----------KVEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGKTLL 532
                       ||.|::|.|....|..:|..:.|| :|.:...|......|:||:||||.||||:
Mosquito   540 FSDSLGAPKVPKVLWSEIGGLAKLKSEIQNSIGLP-LRHKHLMGKNMRRSGILLYGPPGTGKTLI 603

  Fly   533 ARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSER--SSSE 595
            |:||||||:.:||::....|.:.|||..|:.||.:||.||...|.::|:||:|||...|  |...
Mosquito   604 AKAVATECNLSFLSVQGPELLNMYVGQSEQNVREVFARARTASPCVLFLDELDSLAPNRGVSGDS 668

  Fly   596 HEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYV--SLPDEQTR 656
            .....|:.::.|.|.||:..:| |.:|.:|||||||..:|.|.||  ||.|.:||  |...|...
Mosquito   669 GGVMDRVVSQMLSEMDGISKDP-GQQIFILAATNRPDLIDPALLRPGRFDKLLYVGPSCTVEDKE 732

  Fly   657 ELLLNRLLQKQGSPLDTEALRRLAK-ITDGYSGSDLTALAKDAALEPIRE--------------L 706
            .:|  |.:..:....:|..||::|: :....:|:|:.::..:|.|..:|.              |
Mosquito   733 SVL--RAVTGRFRLAETLTLRKIAESLKQDMTGADMYSICSNAWLSAVRRTVKEAIAGDSIDEGL 795

  Fly   707 NVEQVKCLDISAMRAITEQDFHSSLKRIRRSVAPQSL 743
            |.:||         .:||.||..|:|:...|::|..:
Mosquito   796 NADQV---------IVTEDDFKESVKKFIPSISPADM 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spasNP_651206.3 MIT_spastin 230..308 CDD:239142
P-loop_NTPase 482..>538 CDD:304359 23/55 (42%)
AAA 515..652 CDD:214640 65/142 (46%)
AAA 519..650 CDD:278434 63/136 (46%)
Vps4_C <722..754 CDD:286426 8/22 (36%)
AgaP_AGAP001612XP_321486.4 SpoVK 337..819 CDD:223540 139/486 (29%)
P-loop_NTPase 339..461 CDD:304359 25/98 (26%)
AAA 590..723 CDD:278434 62/133 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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