DRSC/TRiP Functional Genomics Resources

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Protein Alignment spas and LOC1280986

DIOPT Version :10

Sequence 1:NP_651206.3 Gene:spas / 42846 FlyBaseID:FBgn0039141 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_320860.5 Gene:LOC1280986 / 1280986 VectorBaseID:AGAMI1_003191 Length:736 Species:Anopheles gambiae


Alignment Length:470 Identity:126/470 - (26%)
Similarity:203/470 - (43%) Gaps:100/470 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 QRLSLKEKQKEEAQSKPQKTREPMLAGMTN--EPMKLRVRSSGYGPKATT--------------- 365
            |.:||.::.:|.|::       .::.|.|:  |.|..|:|..|...|..|               
Mosquito   323 QFVSLVDQYRESAEN-------VIIIGTTSSVESMDTRLRRPGRLDKEITLGIPSKEQRIDILRC 380

  Fly   366 ---SAQPTASGRKLTIGSKRPVNLAVANKSQTLPRNLGSKTSVGAVQRQ--PAKTAATPPAVRRQ 425
               :|:.|.:..:|.:..:|.... |..:.:.|..||     |..:.:|  |.:.|.        
Mosquito   381 FYATARGTLTDEQLDLVGQRTAGY-VGAELELLYYNL-----VREMHKQQLPFEEAL-------- 431

  Fly   426 FSSGRNTPPQRSRTPINNNGPSGSGASTPVVSVKGVEQKLVQLILDEIVEGGAKVEWTDIAGQDV 490
                  ...|:...|.|....:|                        :|...|.:......|.|.
Mosquito   432 ------AEIQKKHRPSNLRNATG------------------------LVGREATLSLDSFGGMDE 466

  Fly   491 AKQALQEMVILPSVRPELFTGLRA-PAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTS 554
            .|..|:..::.....|..|..|.. |.:|:||:||||..||.||:.:|.|...|||::|||.:.|
Mosquito   467 LKALLRLCIVEQLANPARFQRLGIHPLRGILLYGPPGCAKTTLAKCLAAETGMTFLSLSAAQVYS 531

  Fly   555 KYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSS-----SEHEASRRLKTEFLVEFDGLP 614
            .||||.|||:..:|..||...|:::|:||:|||:..|.:     .....:..:.:..|:|.||:.
Mosquito   532 PYVGDAEKLITRVFNEARTNAPAVVFLDEIDSLVGNRGTGGMKGGSSAVNMGVLSTLLMEMDGIG 596

  Fly   615 G--------NPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGS 669
            .        :.|..|:||:||||||..:|:|.||  |.||.::|..||.:.|..:|.::......
Mosquito   597 QAEQAASALSEDAKRVVVIAATNRPDMVDDALLRPGRLTKLIHVPAPDGKGRLEILRKIATNVPF 661

  Fly   670 PLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRAITEQDFHSSLKRI 734
            ..|.: |..:|:.|:.|||:||..|...|||....|         |::| ..:|.....|:|:.:
Mosquito   662 AEDVQ-LELVAEQTERYSGADLQNLCTQAALNAATE---------DLNA-TVVTMAHLRSALQDV 715

  Fly   735 RRSVAPQSLNSYEKW 749
            |.|:..:.::.|..:
Mosquito   716 RPSLTKEQIDWYHSY 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spasNP_651206.3 MIT_spastin 230..308 CDD:239142
RecA-like_spastin 484..648 CDD:410932 67/179 (37%)
AAA_lid_3 676..727 CDD:465537 16/50 (32%)
Vps4_C <722..754 CDD:462762 6/28 (21%)
LOC1280986XP_320860.5 None
Blue background indicates that the domain is not in the aligned region.

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