DRSC/TRiP Functional Genomics Resources

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Protein Alignment spas and LOC1280899

DIOPT Version :10

Sequence 1:NP_651206.3 Gene:spas / 42846 FlyBaseID:FBgn0039141 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_061511850.1 Gene:LOC1280899 / 1280899 VectorBaseID:AGAMI1_000934 Length:960 Species:Anopheles gambiae


Alignment Length:574 Identity:111/574 - (19%)
Similarity:194/574 - (33%) Gaps:180/574 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 KEQQQSLNHPSELNREGDG-------QEQQLSNQPQRFRPIQPLEMAANRPGGGYSPGPGDPLLA 227
            ::|...|..|.:..:|.|.       ::::...:..|.:.:...:.|..|..|            
Mosquito   461 QKQLDKLKTPEQKKKEADAMKAAKEREQEKKQEEKARLKELAREKRARERKEG------------ 513

  Fly   228 KQKHHHRRAFEYISKALKIDEENEGHKELAIELYRKG---IKELED--GIAVDCWSGRGDVWDRA 287
              |.:.....|:::.|....||       .:..|||.   :.||::  .:.:..|.    ..|:.
Mosquito   514 --KTYDFTEPEFMTNAYLTLEE-------TLARYRKDWAFVNELDNLQDLPIMEWI----TLDKF 565

  Fly   288 QRLHDKMQTNLSMARDRLHFLALREQDLQMQRLSLKEKQKEEAQSKPQKTREPMLAGMTNEPMKL 352
            ..:|.::..       .:|.|...|::|....|...|:.|    .||.|.::|            
Mosquito   566 AEVHQELHA-------EVHELLKSERELLQMALCKDERMK----YKPPKPKKP------------ 607

  Fly   353 RVRSSGYGPKATTSAQPTASGRKLTIGSKR--PVNLAVANKSQTLPRNLGSKTSVGAVQRQPAKT 415
                            |.|.|.|   |.||  |::.......:::...|        |:|...||
Mosquito   608 ----------------PRAKGAK---GKKRKEPIDPTADLSVESILNEL--------VERNVLKT 645

  Fly   416 AATPPAVRRQFS---SGRNTPPQRSRTPINNNGPSGSGASTPVVSVKGVEQKLVQLILDEIVEGG 477
            ..     :|.|.   ...|......|..:..:.|.|.|.              |:.||...:.| 
Mosquito   646 CR-----KRTFEDYIGDFNYAAFERRNRLEQDPPPGMGE--------------VRTILQSYLYG- 690

  Fly   478 AKVEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGKTLLARAVATECSA 542
                                |..|.:.:|          |.|.|.||||.|||||..|:..|..:
Mosquito   691 --------------------MGPLAAPKP----------KSLCLVGPPGYGKTLLLEAICNETGS 725

  Fly   543 TFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEV-----------DSLLSERSSSEH 596
            |..::|..:.......:....::.:...||.:|||::.|:.|           :..|......:|
Mosquito   726 TLFDLSVDTCGPVEPNNMAYFLQLVLRAARLLQPSVLAIEGVHRAFYKKVPQPEQPLDPAKLGKH 790

  Fly   597 EAS---RRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRR-FTKRVYVSLPDEQTRE 657
            ...   ::||.|              |:::::...::|.......|:: |.|.:.:..||..:..
Mosquito   791 LFKLIVKQLKPE--------------DKVLLVGTCDQPWVAKVGPLKKCFDKILLLPRPDYGSTV 841

  Fly   658 LLLNRLLQKQGS-PLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRELNVEQ 710
            ||....|::..: |.|.: |..|||:|.|||...:...|:..       ||:.:
Mosquito   842 LLWQYALRRFPTVPRDLD-LSALAKVTTGYSAGQILECARQV-------LNIRR 887

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spasNP_651206.3 MIT_spastin 230..308 CDD:239142 14/82 (17%)
RecA-like_spastin 484..648 CDD:410932 36/178 (20%)
AAA_lid_3 676..727 CDD:465537 11/35 (31%)
Vps4_C <722..754 CDD:462762
LOC1280899XP_061511850.1 None
Blue background indicates that the domain is not in the aligned region.

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