DRSC/TRiP Functional Genomics Resources

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Protein Alignment spas and AgaP_AGAP012684

DIOPT Version :9

Sequence 1:NP_651206.3 Gene:spas / 42846 FlyBaseID:FBgn0039141 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_307148.3 Gene:AgaP_AGAP012684 / 1268587 VectorBaseID:AGAP012684 Length:471 Species:Anopheles gambiae


Alignment Length:337 Identity:96/337 - (28%)
Similarity:154/337 - (45%) Gaps:67/337 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   442 NNNGP-------SGSGASTPVVSVKGVEQKLVQLI------LDEIVEGGAKVEW----TDIAGQD 489
            :.|||       .|...:..||:.:..|...:.|:      :..:.:.....:|    ..|.|.|
Mosquito   140 SGNGPVEPKRVNFGRLLANTVVTFEKAESSGLNLVGRSKGRVTAVRQSIINPDWDFGRMGIGGLD 204

  Fly   490 -----VAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNI-S 548
                 :.::|....|..|.|..:|  |.: ..||:||:||||.||||:||.:.|..:|....| :
Mosquito   205 REFNAIFRRAFASRVFPPEVVEQL--GCK-HVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVN 266

  Fly   549 AASLTSKYVGDGEKLVRALFAVA----RHMQPS----IIFIDEVDSLLSER-----SSSEHEASR 600
            ...:..||||:.|..||.|||.|    :.:.|:    ||..||:|::...|     :|..|:.  
Mosquito   267 GPQILDKYVGESEANVRRLFADAEEEEKRLGPASGLHIIIFDEIDAICKARGTVGGNSGVHDT-- 329

  Fly   601 RLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLN-- 661
             :..:.|.:.||:   ...:.|:|:..|||...:|||.||  |...::.:|||:|:.|..:||  
Mosquito   330 -VVNQLLAKIDGV---EQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEEGRVQILNIH 390

  Fly   662 ----RLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIREL-----NVEQVKCLDIS 717
                :..:|....:|   ||.|.:.|..:||::|..|.:.|....:..|     .||    :|.:
Mosquito   391 TRRMKEFKKLAPDVD---LRELGQKTKNFSGAELEGLVRAAQSTAMNRLIKAASKVE----VDPA 448

  Fly   718 AMR--AITEQDF 727
            ||.  .:|.:||
Mosquito   449 AMEKLMVTREDF 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spasNP_651206.3 MIT_spastin 230..308 CDD:239142
P-loop_NTPase 482..>538 CDD:304359 24/64 (38%)
AAA 515..652 CDD:214640 53/152 (35%)
AAA 519..650 CDD:278434 49/146 (34%)
Vps4_C <722..754 CDD:286426 3/6 (50%)
AgaP_AGAP012684XP_307148.3 CDC48_N <10..53 CDD:215012
CDC48_2 81..>126 CDD:215011
AAA 234..379 CDD:214640 53/150 (35%)
AAA 236..377 CDD:278434 49/146 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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