Sequence 1: | NP_651206.3 | Gene: | spas / 42846 | FlyBaseID: | FBgn0039141 | Length: | 758 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004918255.2 | Gene: | smc6.1 / 100495634 | XenbaseID: | XB-GENE-6071284 | Length: | 1128 | Species: | Xenopus tropicalis |
Alignment Length: | 727 | Identity: | 131/727 - (18%) |
---|---|---|---|
Similarity: | 245/727 - (33%) | Gaps: | 247/727 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 150 VIYRPHRRDCNIEI-VVQNSSKEQQQSLNH---------PSELNREGDGQEQQLS-NQPQ----R 199
Fly 200 FR-PIQPLEMAANRPGGGYSPGPGDPLLAKQKHHHRRAFEYISKALKIDEENEGHKELAIELYRK 263
Fly 264 GIKELEDGIAVDCWSGRGDVWDRAQRLHDK-MQTNLSMARDRLHFLALREQDLQM--------QR 319
Fly 320 LSLKEKQ-KEEAQSKPQKTRE-----PMLAGMTNEPMKL-RVRSSGYGPKATTSAQPTASGRKLT 377
Fly 378 IGS---KRPVNLAVA----------------NKSQTLPRNLGSKTSVGAVQRQPAKTAATPPAVR 423
Fly 424 RQFSSGRNTPPQ-------------RSRTPINNNGPSGSGA---STPVVS-----VKGVEQKLVQ 467
Fly 468 LILDEIVEGGAKVEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGKTLL 532
Fly 533 ARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHE 597
Fly 598 ASRRLK--TEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLL 660
Fly 661 N-RLLQKQGSPLDTEALRRLAKITDGYS--GSDLTALAKD------------------------- 697
Fly 698 ----AALEPIRELNVEQVKC-----LDISAMRAITEQDFHSSLKRIRRSVAPQS---------LN 744
Fly 745 SYEKWSQDYGDI 756 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
spas | NP_651206.3 | MIT_spastin | 230..308 | CDD:239142 | 18/78 (23%) |
P-loop_NTPase | 482..>538 | CDD:304359 | 13/55 (24%) | ||
AAA | 515..652 | CDD:214640 | 23/138 (17%) | ||
AAA | 519..650 | CDD:278434 | 23/132 (17%) | ||
Vps4_C | <722..754 | CDD:286426 | 4/40 (10%) | ||
smc6.1 | XP_004918255.2 | Smc | 87..1107 | CDD:224117 | 131/727 (18%) |
ABC_SMC6_euk | <1015..1113 | CDD:213243 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165166210 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |