DRSC/TRiP Functional Genomics Resources

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Protein Alignment spas and katnal2

DIOPT Version :9

Sequence 1:NP_651206.3 Gene:spas / 42846 FlyBaseID:FBgn0039141 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001090643.1 Gene:katnal2 / 100036615 XenbaseID:XB-GENE-5827282 Length:542 Species:Xenopus tropicalis


Alignment Length:589 Identity:186/589 - (31%)
Similarity:282/589 - (47%) Gaps:126/589 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 KALKIDEENEGHKELAIELYRKGI------KELEDGIAVDCWSGRGDVWDRAQRLHDKMQTNLSM 300
            :||::..:|...:||..|..||.:      ..|::|           ..|.|..|  :.:|.:|:
 Frog     6 QALRVASQNREAEELRTEARRKNLLILIMHYLLQEG-----------YMDSANSL--EQETKISL 57

  Fly   301 ARDRLHFLALREQDLQMQRLSLKEKQKEEAQSKPQKTREPMLAGMTNEPMKLRVRSSGYGPKATT 365
            .|    |......||:...:..:.....:.|..|:.|::.:       ....||:|         
 Frog    58 RR----FDVCDNVDLETILMEYESYYYIKFQKYPKITKKAL-------DHDSRVQS--------- 102

  Fly   366 SAQPTASGRKLTIGSKRPVNLAVANKSQTLPRNLGSKTSVGAVQRQPA-----KTAATPPAVRRQ 425
              :|.::|:....||         |.:|.||| :..:|    |..:|.     :|.|...|:.|:
 Frog   103 --KPRSAGKLRRAGS---------NSTQGLPR-IAQQT----VLHRPVSGSYFRTHAHQKALSRE 151

  Fly   426 FS---SGRNTPPQRSRTPINNNG---PSGSGAST---PVV--------SVKGVEQ---------- 463
            .|   :|.|:|.:.|...:|.:.   .||.|..|   .|:        ::||..|          
 Frog   152 NSKQENGGNSPREASEIGLNVSAISKTSGEGGQTRRRQVIDFRSMIQDTIKGASQEIALNSLNCN 216

  Fly   464 ----------------------KLVQLILDEIVEGGAKVEWTDIAGQDVAKQALQEMVILPSVRP 506
                                  :|..:|..:|......|.|.||.|.|.||:.::|.|:.|...|
 Frog   217 PDPSERLIKPVGAFIGGNSEMRELAAVISRDIYLQNPNVRWDDIIGLDAAKRLVKEAVVYPIRYP 281

  Fly   507 ELFTGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVA 571
            :||||:.:|.|||||:||||.||||||:||||||:.||.||||:::.||:.||.|||||.||.:|
 Frog   282 QLFTGILSPWKGLLLYGPPGTGKTLLAKAVATECNTTFFNISASTIVSKWRGDSEKLVRVLFELA 346

  Fly   572 RHMQPSIIFIDEVDSLLSERSS---SEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQE 633
            |:..||.||:||::|::|:|.:   .|||.|||:|||.||:.|||..:  .|.:.||||:|.|.|
 Frog   347 RYHAPSTIFLDELESVMSQRGTGPGGEHEGSRRMKTELLVQMDGLARS--DDLVFVLAASNLPWE 409

  Fly   634 LDEAALRRFTKRVYVSLPDEQTRELLLNRLL----QKQGSPLDTEA-LRRLAKITDGYSGSDLTA 693
            ||.|.|||..||:.|.||.::.|:.::...|    ...|..|.|:. ...|...||||||||:..
 Frog   410 LDYAMLRRLEKRILVDLPSKEARQAMIQHWLPPVSNSSGVELRTDLDYSTLGAETDGYSGSDIRL 474

  Fly   694 LAKDAALEPIREL------NVEQVKCLDISAMRAITEQDFHSSLKRIRRSVAPQSLNSYEKWSQD 752
            :.|:||:.|:|::      :..:.|.|.:.::..:|..||...|...:.| |......|..|.::
 Frog   475 VCKEAAMRPVRKIFDALENHHSEHKNLPVISLDTVTTSDFLEVLAHTKPS-AKSLAEKYAAWQKE 538

  Fly   753 YGDI 756
            :..:
 Frog   539 FESV 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spasNP_651206.3 MIT_spastin 230..308 CDD:239142 16/71 (23%)
P-loop_NTPase 482..>538 CDD:304359 33/55 (60%)
AAA 515..652 CDD:214640 82/139 (59%)
AAA 519..650 CDD:278434 78/133 (59%)
Vps4_C <722..754 CDD:286426 8/31 (26%)
katnal2NP_001090643.1 LisH 25..57 CDD:128913 8/44 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 94..126 12/59 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 142..168 8/25 (32%)
SpoVK <245..526 CDD:223540 126/283 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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