DRSC/TRiP Functional Genomics Resources

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Protein Alignment Miro and RhoBTB

DIOPT Version :10

Sequence 1:NP_651205.2 Gene:Miro / 42845 FlyBaseID:FBgn0039140 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_001262107.1 Gene:RhoBTB / 40249 FlyBaseID:FBgn0036980 Length:783 Species:Drosophila melanogaster


Alignment Length:517 Identity:99/517 - (19%)
Similarity:162/517 - (31%) Gaps:197/517 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VRILLVGDAGVGKTSLILS-----------LVSEEYP-----------EEVPPRAEEITIPANVT 54
            |:.:||||..||||.||.:           |:|...|           ::|..|:.|:....||:
  Fly    14 VKCVLVGDTAVGKTRLICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVNVS 78

  Fly    55 PEQVPTSIVDFSAVEQSEDALAAEINKAHVVCIVYAVDDDDTLDRITSHWLPLVRAKCNPSLDGE 119
            .....|    |.  :..:|...| ..::.||.:.:::....:|......|.|.:|..| |.:   
  Fly    79 LRLWDT----FG--DHDKDRRFA-YGRSDVVLLCFSIASPISLRNCKMMWYPEIRRFC-PDV--- 132

  Fly   120 GDAEAEAEGDTQREPIRKPIVLVGNKIDLIEYSTMDSVLAIMEDYPEIESCVECSAKSLHNISEM 184
                              |::|||.|.|| .|...|      |:|                   :
  Fly   133 ------------------PVILVGCKNDL-RYMYRD------ENY-------------------L 153

  Fly   185 FYYAQKAVLHPTSPLYMMEEQELTSACKKSLVRIFKICDIDGDNLLNDYELNLFQRRCFNTPLQP 249
            .|:.:|...             :.:|.|..||                                 
  Fly   154 SYFGEKGTF-------------VRAALKSDLV--------------------------------- 172

  Fly   250 QILDEVKAVIQKNVPDGIYNDAVTLKGFLFLHCLFIQRGRNETTWAVLR---------RFGYND- 304
             :.||.:|| .|.:....|..:|           |...|.||.....:|         ||...: 
  Fly   173 -MPDEARAV-AKELGVAYYETSV-----------FTYFGVNEVFENAIRSALIARRQQRFWMTNL 224

  Fly   305 ---QLEMCQEYLRPPLKIPPGSSTELSHRGQ----QFLIAVFERYDRDGDGALSPEEHK-MLFST 361
               |..:.|...|||...||..:..:.:..|    .||...:......|.|......|: ||.:.
  Fly   225 KKVQKPLLQAPFRPPKPPPPEVTVMVGNYRQDIYNMFLSQAYTDLVLVGAGGTKFAVHRFMLAAA 289

  Fly   362 CPAAPWSYSTDI--------RKSCPINETTGWVTLHGW------LCRWTLMTLIDVVKTMEYL-- 410
            ........||::        .:|..::.|.|..|:..:      |.|:...|    .:..|:|  
  Fly   290 SSIFQRLLSTELTDMGGRSSSESSMVSSTFGEATIADFNDDTEALIRYESRT----QRMWEHLKR 350

  Fly   411 --AYLGFNVHE----ND----------SQLAAIHVTRERRID-------LAKRQSSRSVYKC 449
              :|....:.|    ||          ..:..:||...|.::       |:|..|.:::::|
  Fly   351 RSSYQALPLMESKRSNDLYRELHHPVLQSIRLVHVENHRGVNGLQTIVTLSKLISPQALHQC 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MiroNP_651205.2 Miro1 10..195 CDD:206680 44/204 (22%)
EF_assoc_2 245..329 CDD:462444 21/96 (22%)
FRQ1 <333..>360 CDD:444056 7/27 (26%)
EF_assoc_1 367..437 CDD:462443 18/108 (17%)
Miro2 444..620 CDD:206679 1/6 (17%)
RhoBTBNP_001262107.1 RhoBTB 12..210 CDD:133275 60/309 (19%)
BTB1_POZ_RhoBTB 255..452 CDD:349608 30/162 (19%)
BTB2_POZ_RhoBTB 475..582 CDD:349609
BACK_RHOBTB 593..669 CDD:350574
Blue background indicates that the domain is not in the aligned region.

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