Protein Alignment Miro and Rho1

DIOPT Version :9

• Sequence 1: NP_001262895.1
• Gene: Miro / 42845
• FlyBaseID: FBgn0039140
• Length: 673
• Species: Drosophila melanogaster
• Sequence 2: NP_477098.1
• Gene: Rho1 / 36775
• FlyBaseID: FBgn0014020
• Length: 192
• Species: Drosophila melanogaster
• Alignment Length: 195
• Identity: 51/195 - (26%)
• Similarity: 82/195 - (42%)
• Gaps: 36/195 - (18%)

  Fly    13 RILLVGDAGVGKTSLILSLVSEEYPE-EVPPRAEEITIPANVTPEQVPTSIVDFSAVEQSEDALA 76
            ::::|||...|||.|::....:::|| .||...|.......|..:||..::.|.:..|..:....
  Fly     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71

  Fly    77 AEINKAHVVCIVYAVDDDDTLDRITSHWLPLVRAKCNPSLDGEGDAEAEAEGDTQREPIRKPIVL 141
            .......|:.:.::||..|:|:.|...|.|.|:..| |::                     ||:|
  Fly    72 LSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNV---------------------PIIL 114

  Fly   142 VGNKIDLIEYSTMDSVLAIMEDYP-------------EIESCVECSAKSLHNISEMFYYAQKAVL 193
            ||||.||.........||.|:..|             ...:.:||||||...:.::|..|.:|.|
  Fly   115 VGNKKDLRNDPNTIRDLAKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFETATRAAL 179

  Fly   194  193
              Fly   180  179

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Miro	NP_001262895.1	Miro1	10..195	CDD:206680	51/195 (26%)
		RHO	14..195	CDD:197554	51/194 (26%)
		EF_assoc_2	247..328	CDD:285547
		EF_assoc_1	367..437	CDD:285546
		Miro2	444..620	CDD:206679
		Ras	448..602	CDD:278499
Rho1	NP_477098.1	RhoA_like	5..179	CDD:206662	50/193 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45466327
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24072
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	2.030