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Protein Alignment LSm3 and LSM3A
DIOPT Version :9
Sequence 1: | NP_001163707.1 |
Gene: | LSm3 / 42842 |
FlyBaseID: | FBgn0051184 |
Length: | 103 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_173542.1 |
Gene: | LSM3A / 838714 |
AraportID: | AT1G21190 |
Length: | 97 |
Species: | Arabidopsis thaliana |
Alignment Length: | 87 |
Identity: | 65/87 - (74%) |
Similarity: | 82/87 - (94%) |
Gaps: | 0/87 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 VKEPLDLIRLSLDEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTA 79
|:|||||||||::|::|||:|::|||||:||||||||||:|||.||.:||:|||:|||||:.:|.
plant 9 VREPLDLIRLSIEERIYVKLRSDRELRGKLHAFDQHLNMILGDVEEVITTIEIDDETYEEIVRTT 73
Fly 80 KRTIPMLFVRGDGVILVSPPMR 101
|||:|.||||||||||||||:|
plant 74 KRTVPFLFVRGDGVILVSPPLR 95
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
LSm3 | NP_001163707.1 |
LSm3 |
17..98 |
CDD:212477 |
60/80 (75%) |
LSM3A | NP_173542.1 |
LSm3 |
11..92 |
CDD:212477 |
60/80 (75%) |
Information from Original Tools:
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